Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1196 ATGCATTTCAACCAAGCTCTTATGGGGTCAAAGGCTGAAAAGCACTCTGATGAAAACTGTCGCTTAGTGGAGAATAATCAGCATTCTGCAGATGAGGGTGAAGGGTCTTATGTTAGTGGCAGAACTTGTGAAAGATCAAAGCATTCTGAAAGTGAAACCAGTATCATGCCTAGTATTTTCTCCAGTCACGATTCTCTATCTGAAAATACTGAGAATAAACAGTTCATTTCAGAAAAGTGTCAGGATTCTAAGTGTTTAGAAGAGGTTCCCGAAAAATTGTCAGAATGCTGTATGGAAAATGTTGATATATCATTGACCAACGATAGAGAACCTATCATTGTTTCTGGTGAAAAATCTCTTTCAAATAAGGATGAACTTGCTAATGGTACGCCCAAAGTGTCACAAAAAATGTATCCAAAGTCAGAACCTGATTTTGACATTGATGTTAGTGTTGTTGAAGATGGGGATCATAAGTGTGCAGCCCATGATGGACTGCATGAGAAGGCTGAGGAGCAGGTTAAATCACTTGGGATATCTGTACCTAAAGCAGAAGATGAGAGTGATGAATCTGATTTTGTTGAGCATGATATAAAAGTATGTGACATATGTGGAGATTCCGGTCGTGAGTACCTCCTTGCCATTTGTAGTAGGTGCAGTGATGGTGCAGAGCACACATACTGCATGCGGGAAATGCTTGAAAAAGTGCCTGAAGGGGATTGGTTTTGTGAGGAATGCCAATATGCTGAGGAGACTGCCAACCGAAGATTGGATGTTGAAGGAAAAAATGGTCATACAGTTGGTTCCACTTCTCAAATTTCTGGCAAAAGGTCTTCTGAAATCATGGAATTAGTTGCAGCAGCAAAGAGGCGAGCCCTCGAATCAAGCACGGGATCACTGAAGGCGTCAAGCCCCAGGAGTTTAGTTCCATTGTCACGGGAGTCTTCATTCAAGAGCTTAGACAAAGGAAAGGTGAAACCTGGTCAAACTTCAAGGAGAATGGGTACATTGTTGAAGTCTTCTTCATTCAACAACTTCAATCCCAAATCAAGAGTCAAACTTGATGATGATGTTCCTCAAAAACAGAAAGGGGTTGGTGAACATGTTTCTAAGAACTTGGAGACACCTGGTAGGACAATAGGAAAATCAATGTCATTCAAATCGTCAAATTTGGGTCATGCTACTGAATCAAATGTTAAACTGCTTTCTTCTAAGTCTGGAACTGCTCAGGATTTGAAAGGATCGAGCCTTGCAAAAGAATCAGGTGTATTTGACAGGAAATTTCTGTCTAGGATTGATCGTCGTGTCGTCTGTTCAACTATGGCTAGTTCTGTCGTTTCCACATCTAAGCATGATCAGAAGCTTACACCTCGTGGTGAAACTGTTAAACCTTCAGCAATTAACTGCAACCGGGATTTTAAAGTTAACCATGATGGGCAATCAAGTTCATTATCAAAGCCCCTGTATAATATAAGCAACAGAAGTCCAGAACCTCAAGTTATTTCAGAGAGAACGTCAACCAGTGTGTATGAAACTCAACAGGATGGGCTGCCTCGATTGCGAGATTCAACAAAACAGGTTGACAAAACAAAAGATATCTATACTCATTGTGTTAGGTCAGGTACTAATGCTTCAAAATCTCCGTTCTGTCATAAATGTAAAGATTATGGCCATGCTACAGAATGTTGCACAGTTGGTGTAACACAGGAATATGGTGCTGATGGATCACTTACTGCCGCAAGTAGTTCAAAAGAGTTGCATAAAGGTAATAGATTGAAGGCTGCAATTCAGGCAGCTTTGCTTAAAAGGCCTGAAATACACAAGAAGAAAAATCTACATGATCAAACTGATCAGTTTCCTACATCCGCCACAGTCTTGAAAAGTAAAGTCAGTTCTCAAGACCAAGTGGAGGTCTCTGCTTCTAACACACTGAAAAATAGTATTTCTGTTGAAGAAACCAATCCGAGGCAGGAAATGCTTGGGAGTTCTACATCTGAAACGTCCAAATGCTTGTCTGCCAATGATTTGAAGCAACTTAAAACTGATGTTTGCTCCCAAATGAAAAAGTTGGATTCTGTTAGTCCTGCTTCTGAAAATCCTGTGGTGAAAGACTTGCCCAATCATGCCTTGGCAATCTTAAGTGTTACTTCAGAGATGTCAGCCATTCCAGAATACAAATACATTTGGCAGGGTGTCTTTGAAGTGAATAGAAGTGGAAAGTCTCCTGACATTTATACCGGAATTCAAGCACATTTATCCTCATGCGCTTCCCCTAAGGTTCTTGATGTAGTGAACAAGTTTTTACCTGAAATTTCCCTGCATGAAGTTTCTCGCTTGAGCACATGGCCTTCACATTTTCATCAATGTGGCACTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGACATGATTTAGCACTCAAAGGGTTTTTTGATGGTGTCGAACTTCTCATATTTGCTTCCAATCAGCTCCCTGAAAATTCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGCATATTTAGAGGGAGGAGGAATAATCATTCAGATTCTGCAAAAAATATTGTTTTACCAAGTTTGAATGTGTCGGTGCCAAATGAGAAGGATTTTCCGACTGCTGTCATGACCTTGTCTGATACTCGCTGTTCACCAGTGCGCATCGATGAAGAATCAATAGCTTGTGGTAAAGCTTTCAGTGAACTTCCAGCCACTTCCATTGACCAAGGTCATATTATGCTTAGTAAGGATTTTGATATAGAAACTATTTTTGACAAGACACATTTGGGTTCACAAGTAAACTTCGATAGGCAAGATAGTAGAATCAACACCAAATGTTCGTCAAGGATTTCAACAAACGGTATAGAACCGTGTCGAGAAATGAATTCCACTGGTTCGTCCCTGAAAGAGAAAGGTAGTTTGTCAAAGCATGAACTTCACAGAGAGTCTAAACCTCCTGAAGAGGTGGGAACAATTGTAAGAGCTATGACTGTGGAATCAAAAGCTAGTTATGGTATTTCTGTCAAGCAAGAGAACTCCGTGTCTTCAAGGATTCCTTATGTTGACAATCAAGAGGCACTCACTGCAAACAGCACCAAGAAAGATAAAATTTCAGAGAGAACAAACAATGATGAAAATCAACGAAGGCCTAAAAGGAAAGAGAGAGAAGATGATCTCAATATTAATGTGGAAGCAACATGTCAGGGAGATCTGTCCATAGAAGCGGTCAACTGTCGGCTACCTAATGATATAAAAGTTGAGCATATAGACCATTCTGACACAGTTATTGAGGCTTCTGCAGCTAGTTGTCAGGAAATGCCTCGGAATAATGTAAAAAGGAAGTTGGAAGATACAGACTGTTCAAGCAAGCTGCAGTCGGATTTCAGTGGAATCTATGGATGTTACAGTTCTGTAGGTAGGGATTCTTTTAATGGAAGTTCTGCATCACTTGTAAATGATGTTGGTTCCTCTTCTTCGGTTGAAGACAAAGGATGCAAAGAAGCTTGTGATGAGAAAATCATCCATGAGGACCTCGGAACGACGGAAAAAACCTTCTTCCCTATGGATACACACAATACAAATGGCTCGCGATTGGTGCTGAATAGTATGTTACTGAAAGGGCCTCATGAGAACGGTGATATATTTGAAGTTGGGATTCCGAGTCTCGAGCTTGCATTGGGGGGTGAATTGAAACAGTCACAGAAGGGTACACTTCCTTTCTTTGCTGGGATAGCTGACAAGAAAAGTAACCAGGAAAAGACTCCAGACTGTTTGAAAGCTGAGCAAGAGGATGATGACAGTGTTGCTGCATCTCTTTCCCTGTGTCTATCTTTCCCATCTTCTAACAAGGAACCCACCATACTTGCTTCAAAAGATGAGCATTTGCCTGATGAGCATCACATGAATCCTTCGTCGCTCCTTTTTGGGAGATTCACTGACAAATAA 3996 0.4062 MHFNQALMGSKAEKHSDENCRLVENNQHSADEGEGSYVSGRTCERSKHSESETSIMPSIFSSHDSLSENTENKQFISEKCQDSKCLEEVPEKLSECCMENVDISLTNDREPIIVSGEKSLSNKDELANGTPKVSQKMYPKSEPDFDIDVSVVEDGDHKCAAHDGLHEKAEEQVKSLGISVPKAEDESDESDFVEHDIKVCDICGDSGREYLLAICSRCSDGAEHTYCMREMLEKVPEGDWFCEECQYAEETANRRLDVEGKNGHTVGSTSQISGKRSSEIMELVAAAKRRALESSTGSLKASSPRSLVPLSRESSFKSLDKGKVKPGQTSRRMGTLLKSSSFNNFNPKSRVKLDDDVPQKQKGVGEHVSKNLETPGRTIGKSMSFKSSNLGHATESNVKLLSSKSGTAQDLKGSSLAKESGVFDRKFLSRIDRRVVCSTMASSVVSTSKHDQKLTPRGETVKPSAINCNRDFKVNHDGQSSSLSKPLYNISNRSPEPQVISERTSTSVYETQQDGLPRLRDSTKQVDKTKDIYTHCVRSGTNASKSPFCHKCKDYGHATECCTVGVTQEYGADGSLTAASSSKELHKGNRLKAAIQAALLKRPEIHKKKNLHDQTDQFPTSATVLKSKVSSQDQVEVSASNTLKNSISVEETNPRQEMLGSSTSETSKCLSANDLKQLKTDVCSQMKKLDSVSPASENPVVKDLPNHALAILSVTSEMSAIPEYKYIWQGVFEVNRSGKSPDIYTGIQAHLSSCASPKVLDVVNKFLPEISLHEVSRLSTWPSHFHQCGTKEDNIALYFFAKDIESYERHYKGLLDHMIRHDLALKGFFDGVELLIFASNQLPENSQRWNMLFFLWGIFRGRRNNHSDSAKNIVLPSLNVSVPNEKDFPTAVMTLSDTRCSPVRIDEESIACGKAFSELPATSIDQGHIMLSKDFDIETIFDKTHLGSQVNFDRQDSRINTKCSSRISTNGIEPCREMNSTGSSLKEKGSLSKHELHRESKPPEEVGTIVRAMTVESKASYGISVKQENSVSSRIPYVDNQEALTANSTKKDKISERTNNDENQRRPKRKEREDDLNINVEATCQGDLSIEAVNCRLPNDIKVEHIDHSDTVIEASAASCQEMPRNNVKRKLEDTDCSSKLQSDFSGIYGCYSSVGRDSFNGSSASLVNDVGSSSSVEDKGCKEACDEKIIHEDLGTTEKTFFPMDTHNTNGSRLVLNSMLLKGPHENGDIFEVGIPSLELALGGELKQSQKGTLPFFAGIADKKSNQEKTPDCLKAEQEDDDSVAASLSLCLSFPSSNKEPTILASKDEHLPDEHHMNPSSLLFGRFTDK* 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1196 1331 PANTHER - 87 327 - -
Mal6g1196 1331 PANTHER - 327 1077 - -
Mal6g1196 1331 PANTHER - 1078 1320 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 293 390 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 473 516 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 375 390 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 1049 1074 - -
Mal6g1196 1331 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 87 327 - -
Mal6g1196 1331 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 327 1077 - -
Mal6g1196 1331 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 87 - -
Mal6g1196 1331 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1078 1320 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 988 1005 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 349 367 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 1296 1331 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 471 516 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 1036 1074 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 976 1007 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 1 54 - -
Mal6g1196 1331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 258 IPR013083 -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 332 348 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 295 313 - -
Mal6g1196 1331 PANTHER - 1 87 - -
Mal6g1196 1331 MobiDBLite consensus disorder prediction 11 28 - -
Mal6g1196 1331 SUPERFAMILY FYVE/PHD zinc finger 186 250 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1196 Mal-Chr6 19859086 19865449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1196 165 257 C2H2 Transcription Factor Family AT3G01460 29.167 1.56e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1196 - - mtr:MTR_0001s0570 2070.43