Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1194 ATGAATAGCAGTGGTGGCAGTAGTAACGGAGGAGGTGGAGGAGGGATGATGATGGGTTACAGTAAATCATCACCTTTCACAGTTTCTCAGTGGCAGGAACTCGAACATCAAGCTTTGATCTTTAAGTATATGGTTGCTGGTCTCCCTGTTCCACATGATCTTGTCCTTCCTATTCAGACCAGCTTTCACTCTCTTTCTCCCAATCACTTTTTTCACCATCCTATTCCTACCCTGAGTTATTGTTCCTTCTATGGGAAGAAAGTGGACCCGGAGCCAGGACGATGTAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGTCATCCACTGTGACATCACTGACTGTCACTGGTGGCAGCAGCAGAGCTGGTAACTTCCAGAACCTTCCCACAACAAATGCATATGGTAGTGTTCAAAATACTACTGGTTCTGGAACCGACCGTGCCGATTATCATCTTGATACCATTCCCTACGGGATTCCAAGTAAAGAATACAGGTATCTTCAAGGTCTTAAATCTGAAGGTGGAGAACATAGCTTCTTTGCAGAAGCTTCAGGAGGAGAGAACAAGGGTCTCCAAATGGAGTCACAACTGGAAAACACATGGCCTTTAATGTCAACTAGGGTTTCCTCTTTTCCTGCATCAAAATCAACTTGTAATAATTCCATGTTGCAGAGTGATTATCCCCAGCATTCATTTTTATCTAGTGAATATGGATCTGGAGAAGCTGTGAAGGAAGAGGGCCAGCCTCTTCGACCCTTTTTCAGCGAATGGCCTAAGAGCAGGGAGTCATGGTCTGGGTTGGAAGATGAGAGATCCAACCAAACAGCATTCTCAACAACTCAACTTTCAATATCCATTCCTATGTCATCTTCTGACTTCTCTGCCACAAGCTCTCAGTCGCCACATGATAACTAG 1014 0.4566 MNSSGGSSNGGGGGGMMMGYSKSSPFTVSQWQELEHQALIFKYMVAGLPVPHDLVLPIQTSFHSLSPNHFFHHPIPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSLTVTGGSSRAGNFQNLPTTNAYGSVQNTTGSGTDRADYHLDTIPYGIPSKEYRYLQGLKSEGGEHSFFAEASGGENKGLQMESQLENTWPLMSTRVSSFPASKSTCNNSMLQSDYPQHSFLSSEYGSGEAVKEEGQPLRPFFSEWPKSRESWSGLEDERSNQTAFSTTQLSISIPMSSSDFSATSSQSPHDN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1194 337 PANTHER GROWTH-REGULATING FACTOR 5 23 330 - -
Mal6g1194 337 Pfam WRC 90 132 IPR014977 -
Mal6g1194 337 ProSiteProfiles QLQ domain profile. 25 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal6g1194 337 MobiDBLite consensus disorder prediction 121 166 - -
Mal6g1194 337 MobiDBLite consensus disorder prediction 295 314 - -
Mal6g1194 337 ProSiteProfiles WRC domain profile. 89 133 IPR014977 -
Mal6g1194 337 MobiDBLite consensus disorder prediction 130 166 - -
Mal6g1194 337 Pfam QLQ 25 59 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal6g1194 337 SMART QLQ_2 24 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal6g1194 337 PANTHER - 23 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1194 Mal-Chr6 19677183 19680498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1194 26 140 GRF Transcription Factor Family AT2G36400 57.983 5.70e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal6g1194 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1194 - - gmx:100787226 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1194 6 19677183 19680498 Mal6g1194 6 19677183 19680498 ECH