Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1167 ATGAACCATCAACAACCTACTCAAGACCAAATCATGCTTATGTCTCAGTTATTAATCCCAGCTTATGAATACACTCAAATAGTTTCTCCACAACGGGAGAAGAAGCCAAAGCGCAAGCGTAGTAGGAAGAACAAAGGTGGAGAAAGTGCTAATGAACTGAACAAAAAGAGGAAATTGAGTGAAAAACAAGTGAATATTTTGGAGCAAAATTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAAGCTTGCAATGGAGCTAGGTTTGGATCCTAGACAAGTTGCGGTTTGGTTTCAGAATCGAAGAACTAGGTGGAAGAGAACAAGAAACTTGAAGAAGAGTACTCAAATCTTAAAAAATTCACTGAATCCACCATGCTTGAGAAGTGTCTCCTAG 402 0.3831 MNHQQPTQDQIMLMSQLLIPAYEYTQIVSPQREKKPKRKRSRKNKGGESANELNKKRKLSEKQVNILEQNFGNEHKLESEKKDKLAMELGLDPRQVAVWFQNRRTRWKRTRNLKKSTQILKNSLNPPCLRSVS* 134
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1167 133 CDD homeodomain 55 111 IPR001356 GO:0003677
Mal6g1167 133 MobiDBLite consensus disorder prediction 28 61 - -
Mal6g1167 133 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Mal6g1167 133 SUPERFAMILY Homeodomain-like 51 109 IPR009057 -
Mal6g1167 133 ProSitePatterns 'Homeobox' domain signature. 85 108 IPR017970 GO:0000981|GO:0006355
Mal6g1167 133 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 8 124 - -
Mal6g1167 133 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 8 124 IPR045224 GO:0003700
Mal6g1167 133 SMART HOX_1 53 114 IPR001356 GO:0003677
Mal6g1167 133 Gene3D - 53 118 - -
Mal6g1167 133 MobiDBLite consensus disorder prediction 45 61 - -
Mal6g1167 133 Coils Coil 50 70 - -
Mal6g1167 133 Pfam Homeodomain 55 109 IPR001356 GO:0003677
Mal6g1167 133 PRINTS Lambda-repressor HTH signature 81 90 IPR000047 GO:0003677
Mal6g1167 133 PRINTS Lambda-repressor HTH signature 90 106 IPR000047 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal6g1167 Mal-Chr6 17867747 17868236 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1167 1 123 Homeobox Transcription Factor Family AT4G36740 54.331 1.33e-35 120
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal6g1167 Homeodomain 1.8e-17 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1167 K09338 - gmx:100809616 159.458