Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal6g1167 | ATGAACCATCAACAACCTACTCAAGACCAAATCATGCTTATGTCTCAGTTATTAATCCCAGCTTATGAATACACTCAAATAGTTTCTCCACAACGGGAGAAGAAGCCAAAGCGCAAGCGTAGTAGGAAGAACAAAGGTGGAGAAAGTGCTAATGAACTGAACAAAAAGAGGAAATTGAGTGAAAAACAAGTGAATATTTTGGAGCAAAATTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAAGCTTGCAATGGAGCTAGGTTTGGATCCTAGACAAGTTGCGGTTTGGTTTCAGAATCGAAGAACTAGGTGGAAGAGAACAAGAAACTTGAAGAAGAGTACTCAAATCTTAAAAAATTCACTGAATCCACCATGCTTGAGAAGTGTCTCCTAG | 402 | 0.3831 | MNHQQPTQDQIMLMSQLLIPAYEYTQIVSPQREKKPKRKRSRKNKGGESANELNKKRKLSEKQVNILEQNFGNEHKLESEKKDKLAMELGLDPRQVAVWFQNRRTRWKRTRNLKKSTQILKNSLNPPCLRSVS* | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal6g1167 | 133 | CDD | homeodomain | 55 | 111 | IPR001356 | GO:0003677 | |
Mal6g1167 | 133 | MobiDBLite | consensus disorder prediction | 28 | 61 | - | - | |
Mal6g1167 | 133 | ProSiteProfiles | 'Homeobox' domain profile. | 50 | 110 | IPR001356 | GO:0003677 | |
Mal6g1167 | 133 | SUPERFAMILY | Homeodomain-like | 51 | 109 | IPR009057 | - | |
Mal6g1167 | 133 | ProSitePatterns | 'Homeobox' domain signature. | 85 | 108 | IPR017970 | GO:0000981|GO:0006355 | |
Mal6g1167 | 133 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE | 8 | 124 | - | - | |
Mal6g1167 | 133 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 8 | 124 | IPR045224 | GO:0003700 | |
Mal6g1167 | 133 | SMART | HOX_1 | 53 | 114 | IPR001356 | GO:0003677 | |
Mal6g1167 | 133 | Gene3D | - | 53 | 118 | - | - | |
Mal6g1167 | 133 | MobiDBLite | consensus disorder prediction | 45 | 61 | - | - | |
Mal6g1167 | 133 | Coils | Coil | 50 | 70 | - | - | |
Mal6g1167 | 133 | Pfam | Homeodomain | 55 | 109 | IPR001356 | GO:0003677 | |
Mal6g1167 | 133 | PRINTS | Lambda-repressor HTH signature | 81 | 90 | IPR000047 | GO:0003677 | |
Mal6g1167 | 133 | PRINTS | Lambda-repressor HTH signature | 90 | 106 | IPR000047 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal6g1167 | Mal-Chr6 | 17867747 | 17868236 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal6g1167 | 1 | 123 | Homeobox Transcription Factor Family | AT4G36740 | 54.331 | 1.33e-35 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Mal6g1167 | Homeodomain | 1.8e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal6g1167 | K09338 | - | gmx:100809616 | 159.458 |