Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1162 ATGTGGGGATGTCCACAACCCTCATCATCAATCCCAAACAATATGCCCCTTTTCCAACTTTCACTCCCAAGTTCCTCACGAAACGTAGAAAACAGGACAAATGTTGATGATGCTTTTGAGTTTGATGATGGTTATGCCTTTGACATTCACCCTTGTTTGCTTGTGGACCGTGATAAGCTAATCATTGGTGACATGATCGGAGAAGGAGCATTTTCTTCTGTATACAAAGGATGGTATGAAGACCGTCTTGTAGCTATTAAGGTTCTACTCCCAGAAAGAACAGAGGATGCTACACCAGAATGTAAGGCCAAATTTCAGAGGGAGGTGAACCTTTTATCCAGAATTCAACATAGTAATGTTATCAAGTTTATTGGAGCCTCTGTAGAGCCATCAATGATGCTAATCACAGAACTCTTAGAAGGTGGTTCACTTCAGAAAAACATGGGGAGAATCATCTATCCAATGGCTTTTAGTTTGGAACAATGTCTAAGTTATGCTCTTGATATTTCACAAGCTATGGAATATTTACATGAAAATGGAATCATTCACCGTGATCTTAAGCCTGATAATTTACTGCTTACGAAAAACCATAATCATGTTAAAGTTGCTGATTTTGGGTTAGCTAGAGACAATATATGTGATCAAATGACTTGTGAAGCTGGTACTTACCGATATATGGCTCCTGAGGTAATGAGCACTGATCTCCCAAAGGGAGCAAAGAAATGTTATGATCACAAGGCAGATGTGTACAGTTTTGCACTAGTTCTATGGTCTTTGATTAAAAATCAAACTCCATTTAAAGATAGGCATGGCTTCATGGCAGCATATGATGCAATAAACAATATCAGGCCAAGTTTGGATGAATTTCCAGAAGAAATAATTCCCCTGCTGAAATCATGTTGGGCAGAAAACCCAATACTCAGACCAGAGTTCAAGGAAATCACTGACATACTGATAAAGATTCTCCATAATCTTTACACAGCAAAGATTAATGCACTTGCCAGCATAAGACAGAGTGATCACGTTGATATCAATGGTGAAGAAGAAAGTCCAAATGCACAACTTAGTGCAACTAGCTTTGTGTCCACTGATGAGAATGAGACTATGAGACCCAACGGAGGAACCGAGGGTGTTAACAATTTCACATTGGATGAAATATGGTCTAATGAGACTATAAGTGAAGATCAATCTCGATCTCAATTTCAATCTCAATCTCAATCTGAGTCTCAGAGTGGAACACATACACCATTCCGGGACTTGGTTGAAAAGAAACCAAAGAAGAAGAGTAAGATCAAGCGTTTCTTTTCCTATTTTCGTAGCTGCATTGCCTTTTGTTATGGCATTTCATAA 1350 0.3881 MWGCPQPSSSIPNNMPLFQLSLPSSSRNVENRTNVDDAFEFDDGYAFDIHPCLLVDRDKLIIGDMIGEGAFSSVYKGWYEDRLVAIKVLLPERTEDATPECKAKFQREVNLLSRIQHSNVIKFIGASVEPSMMLITELLEGGSLQKNMGRIIYPMAFSLEQCLSYALDISQAMEYLHENGIIHRDLKPDNLLLTKNHNHVKVADFGLARDNICDQMTCEAGTYRYMAPEVMSTDLPKGAKKCYDHKADVYSFALVLWSLIKNQTPFKDRHGFMAAYDAINNIRPSLDEFPEEIIPLLKSCWAENPILRPEFKEITDILIKILHNLYTAKINALASIRQSDHVDINGEEESPNAQLSATSFVSTDENETMRPNGGTEGVNNFTLDEIWSNETISEDQSRSQFQSQSQSESQSGTHTPFRDLVEKKPKKKSKIKRFFSYFRSCIAFCYGIS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1162 449 SUPERFAMILY Protein kinase-like (PK-like) 53 339 IPR011009 -
Mal6g1162 449 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 10 353 - -
Mal6g1162 449 MobiDBLite consensus disorder prediction 349 379 - -
Mal6g1162 449 ProSiteProfiles Protein kinase domain profile. 60 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1162 449 MobiDBLite consensus disorder prediction 394 416 - -
Mal6g1162 449 Gene3D Transferase(Phosphotransferase) domain 1 142 376 - -
Mal6g1162 449 Pfam Protein kinase domain 64 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1162 449 MobiDBLite consensus disorder prediction 346 379 - -
Mal6g1162 449 PANTHER SERINE-THREONINE PROTEIN KINASE 10 353 - -
Mal6g1162 449 Gene3D Phosphorylase Kinase; domain 1 51 140 - -
Mal6g1162 449 CDD STKc_MAP3K-like 66 318 - -
Mal6g1162 449 MobiDBLite consensus disorder prediction 394 424 - -
Mal6g1162 449 SMART serkin_6 60 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1162 449 PRINTS Tyrosine kinase catalytic domain signature 247 269 IPR001245 GO:0004672|GO:0006468
Mal6g1162 449 PRINTS Tyrosine kinase catalytic domain signature 289 311 IPR001245 GO:0004672|GO:0006468
Mal6g1162 449 PRINTS Tyrosine kinase catalytic domain signature 175 193 IPR001245 GO:0004672|GO:0006468
Mal6g1162 449 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Mal6g1162 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Mal6g1162 449 ProSitePatterns Protein kinases ATP-binding region signature. 66 87 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1162 Mal-Chr6 17755046 17760038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1162 42 325 MAP Kinase Kinase Kinase AT5G66710 52.797 1.73e-101 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mal6g1162 Pkinase 5.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1162 - K04427 gmx:106796450 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1162 6 17755046 17760038 Mal6g1162 6 17755046 17760038 ECH