Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1149 ATGTCTGACGTCTCTGATTACTCTGATTCGTCATCTTCAGAATCTCCAACTGAAGAGTCACCACCGCAATCACCACCACCATCACCGCCTTCAAACCCCCCGCCTTCAGACCCACCGCCTTCACAATCACAACCTTCTCCTCCACCACCTACATCAAACAACCCATCCCCACCATCCCCCAATGGATCCGGAAATTCACCAACTCCTGGAGCGGGACGTTCTCCACCAGCCTCCACTGGATCTGGAAATTCACACAAATCACCAACTACACCAACCGGAAAGTCAGATGGTAATTACAACAACAACCAAAACAACAATCACAACGATAATACCAATAAGGCAATAATTGGGGTAGTTGTGGCGGTGGCAGCTGTTCTTCTCCTTTTGGTCATCGTTTGCATTGTTTGCTGCAGGAAGAAGAAAAGAAAGCAAATGTACTATTATGGAGAACACCCACCTCATGGAAAAGGGAATAGTAACTATTACAGCAGTGGGCCGAACTCAAATTACTATGGAGGTCCACATGGTGAACATGTTGTTAGGGTTCAAAATGGAATGGGTCATAATGGTGGTGGTGGTGGTGGTGGTGGATGGGGTGCACCACCACCTCCTCCTAACCTAATGAACAGTGCAGACATGAGCTCTAATTATTCGACCACCGGACCGCCAGCTCTTCCTCCTCCCTCACCAAGCCTTGCTTTAGGGCTTAAAGGAGGCACATTCAGTTATGAGGAATTGGCAGCTGCAACCAATGGATTCATTGATTCAAATTTGATAGGACAGGGTGGTTTTGGCTATGTCCATAAGGGTGTGTTGCCGAGTGGAAAGGAAATAGCTGTTAAGAGTTTAAAATCGGGCAGCGGACAAGGAGAACGGGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGCCATCTTGTTTCACTTGTTGGATATTGTATTTGTGGTGGCCAAAGAATGTTGGTCTATGAATTTATTTCCAATAACACATTGGAGTATCATCTTCACGGAAAGGGTCGTCCTACAATGGATTGGCAGACTAGAATGAGGATTGCAATTGGTTCTGCTAAAGGGCTTGCTTATCTTCATGAGGATTGTCATCCTCGCATTATCCATCGTGATATAAAAGCTGCAAATGTCCTTATTGATGATAGCTTTGAAGCAAAGGTTGCGGATTTTGGATTGGCTAAGTTGACATCTGATAATAATACTCACGTATCAACTCGTGTCATGGGAACTTTCGGGTATCTAGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTTGTAACTGGGAAGCGACCTGTTGATGCATCAATTACCATGGATGATAGCTTAGTGGACTGGGCTCGACCACTACTGACTCATGGACTCGAGGAGGATGGAAACTTTAGTGAGTTGGTGGATCCATTTTTGGAAGGAAACTACAATCCTCATGAACTCACAAGAATGGCAGCTTGCGCTGCTGCTAGCATTCGTCACTCCGCCAAGAGGCGTCCTAAAATGAGTCAGATTGTAAGAACATTAGAAGGAGATGTCTCACTGGATGACTTGAAGGAGGGAATTAGGCCAGGGCACACGCCAGGGCACAACGCTGTTAATGCCTCTTCATCTGGTAGCGAGTATGACACAGTGCAGTACAACTCTGATATGCAGAAGATTAGAAAGACAGTGTTTTCCAGCCAAGACTCAAGCACCAGCAGCTTCTCCAGTGGTGATATGAGCCAAACTCCACAGACGAAGCCGCCACAGCGATTGCCTTAA 1815 0.4595 MSDVSDYSDSSSSESPTEESPPQSPPPSPPSNPPPSDPPPSQSQPSPPPPTSNNPSPPSPNGSGNSPTPGAGRSPPASTGSGNSHKSPTTPTGKSDGNYNNNQNNNHNDNTNKAIIGVVVAVAAVLLLLVIVCIVCCRKKKRKQMYYYGEHPPHGKGNSNYYSSGPNSNYYGGPHGEHVVRVQNGMGHNGGGGGGGGWGAPPPPPNLMNSADMSSNYSTTGPPALPPPSPSLALGLKGGTFSYEELAAATNGFIDSNLIGQGGFGYVHKGVLPSGKEIAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFISNNTLEYHLHGKGRPTMDWQTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELVTGKRPVDASITMDDSLVDWARPLLTHGLEEDGNFSELVDPFLEGNYNPHELTRMAACAAASIRHSAKRRPKMSQIVRTLEGDVSLDDLKEGIRPGHTPGHNAVNASSSGSEYDTVQYNSDMQKIRKTVFSSQDSSTSSFSSGDMSQTPQTKPPQRLP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1149 604 MobiDBLite consensus disorder prediction 65 106 - -
Mal6g1149 604 ProSitePatterns Protein kinases ATP-binding region signature. 259 281 IPR017441 GO:0005524
Mal6g1149 604 MobiDBLite consensus disorder prediction 187 225 - -
Mal6g1149 604 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 21 592 - -
Mal6g1149 604 MobiDBLite consensus disorder prediction 535 561 - -
Mal6g1149 604 Gene3D Transferase(Phosphotransferase) domain 1 329 536 - -
Mal6g1149 604 SMART serkin_6 253 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1149 604 MobiDBLite consensus disorder prediction 19 64 - -
Mal6g1149 604 Pfam Protein tyrosine and serine/threonine kinase 258 523 IPR001245 GO:0004672|GO:0006468
Mal6g1149 604 SUPERFAMILY Protein kinase-like (PK-like) 235 526 IPR011009 -
Mal6g1149 604 MobiDBLite consensus disorder prediction 574 604 - -
Mal6g1149 604 PANTHER RECEPTOR-LIKE KINASE 21 592 - -
Mal6g1149 604 MobiDBLite consensus disorder prediction 1 106 - -
Mal6g1149 604 MobiDBLite consensus disorder prediction 1 18 - -
Mal6g1149 604 Gene3D Phosphorylase Kinase; domain 1 233 328 - -
Mal6g1149 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Mal6g1149 604 MobiDBLite consensus disorder prediction 547 561 - -
Mal6g1149 604 ProSiteProfiles Protein kinase domain profile. 253 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1149 Mal-Chr6 17640486 17644283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1149 59 592 Trihelix Transcription Factor Family AT1G70460 45.965 2.50e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mal6g1149 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1149 - - gmx:100777163 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1149 6 17640486 17644283 Mal5g3479 5 100078143 100082179 ECH
Mal6g1149 6 17640486 17644283 Mal6g1149 6 17640486 17644283 ECH