Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1126 ATGAGAACCAATAGTGGTGAAAAAGTGGAGACTTTACCAAATACAATCTCCTTTCAGGTACATAGTAAAATATGCATAGAACTGATGAAAATAGTGGAGAGCATCATGAGGATATTTCCAGACATAGAGGAAGCAAGGCCAAGATGTTCATCAGGAATAGAATCTCTATGTTTTCTGAACAACTCAATTGAGAAAGCAAAACTTCTTCTTCAACATTGCTCCGAATGCAGCAAACTCTACTTGGCTGTGACAGGGGATGCAGTACTTTCAAGATGCAAAAAAGCAACAAAGTCATTAGAGCAAAGCTTAATTCCCATTCAGGGTATGGTTCCAGTTATGTTGGCTGTAGAGGTTTCTAGAATCATTGATGATCTTGAGTTTGCTACATTTGTTCTGGATTCCGCTGAAGAAGAGGCCGGGAGAGTTTTAAGAGAATTGCTTCACCAAGGTACTTCAACCTCAGATTCGGTGGACGATTTCGAAGTTAAAGCTCTTCAGTTTGCAGCACCAAGACTGAATATAACATCTCAAAAGGCCATTTTAATCGAGAGACGATCTATCAGGAAGTTGCTCGATAAAGTTGGACCAAATGACCCGAAAAAAAGGACGATCTTGAGATATCTTGCGTATCTATTGAAAACGCATGGAAACTCAATGGTGGTGGGAGAACACATAGAGAATTTTTATTCTCGTAGCGAAGAACCAATTGAAAGGGATAACTCTAGTCGCGATTCTCTACGAAGAAATCATGTTGAGTCAGATCGTAGCATGAACTATGATCAGCAAAGGACTCACATGAATCAGGCGGATAGAGTGGCACCACCTGAGGAATACAAGTGTCCAATATCCTCAAGATTGATGTATGATCCTGTTATCATTGCTTCTGGAGTAACATATGAAAGAATGTGGATAAGAAAGTGGTTTAATGAGGGTAAAACTATATGTCCAAAAACAAAAAAGGAACTACCTCATATGACATTAACTCCAAATATTGCCATGAAGGACTTAATATCAAAGTGGTGCAAAAATAATGGTGTCTCCATTCCTGATCCAAGTAGACATACAGAAGATTTTATGTTGTTGGATGCTTCAATCACTTCCATAAAGAGTTTGGGAAGTTATTTCAATGATTTGAACTTGCCAATGGATCTTAGTAACATGTCACTTGGGTCATTGGATAATAGTTTTAATTCAGATGTCTCGCAAGTTAAGACCAACCATGACTTGAATTTGATGATGATCAAGAGTAATGAAAATTCTCATTCTCAGTCTCACAAGCATAAAGTTCATGCAGAGATACATGATTCAGATTTGATGCTCTTGCCTAAACTTCATGATCTTCAATGGGATTCTCAATGTAAGGTCATTGAAGATTTGAAAGATCACATGAGAAGCAATAGCCAAGCTATTTTGTCTGTGTCAGCTGAAAATTTAGTTGAACCAGTAGTCAGATTTTTGAGCAATGCAAATGATCTGCAAGACGTAAAAGCGCTGAGAGCCGGAACTCAGCTTCTGTTGGAATTTGTGAACAACTGCAGGAATGGTATGGCTAACATAAGTGAAGACACATTCATAAAGTTGGCAAATCTTCTTGATTCAGAAGTGATAGGAGAAGTACTTGCCATAATGGAAGAACTTTCTGGAGATGGAAATAGTAAAGCCAAAATTGCAGCATCAAATGCACTCACTTCTGTCTTAAAGTTACTTGATTCTGATAACAAAGGGTTCCAACAACAAGCTATAAGAACAATATACAATTTGTCCTTCAATAGTGAAGTTTGTCCACACATGGTATCTCTCAATTGCATCCCAAAATTGTTACCTTTTTTCGAAGAAAGAGCTGTTTTGAGATACTGCATATATATATTGAAAAACATTTGTGATACTGAAGAGGGTAGAAATTCTGTTGCTGAAACAAAGGGATGCATAACTTCTATTGTTGAAATACTTGAGAGTGGAAGTAATGAAGAGCAAGAACATGCGCTTGAGGTTCTACTATCTTTGTGTTCATGCCCTCAGAGTGTGGATTATTGTAAGTTGATTTTGGAGGAAAATATTATCACTCTTGCCTATATCTCACAGAATGGAAATGATAAAGGAAAAGAAAGTGCCTTGGAATTGATTCATCTTTTGAGAGATGCTAAACATGTTGATAATGAAGATAGGTCCTCTCAGCCAATTACGAATAACAGTTCTACAGATTCCAACAATCACACAGTAGAAAATAGATCATCAAAGAAATCACCATTTCTGAAGAAAATAGGATTGTTCTCGAAATCTACATCACATGCATCTAAAACCAAAAGGTGA 2310 0.3723 MRTNSGEKVETLPNTISFQVHSKICIELMKIVESIMRIFPDIEEARPRCSSGIESLCFLNNSIEKAKLLLQHCSECSKLYLAVTGDAVLSRCKKATKSLEQSLIPIQGMVPVMLAVEVSRIIDDLEFATFVLDSAEEEAGRVLRELLHQGTSTSDSVDDFEVKALQFAAPRLNITSQKAILIERRSIRKLLDKVGPNDPKKRTILRYLAYLLKTHGNSMVVGEHIENFYSRSEEPIERDNSSRDSLRRNHVESDRSMNYDQQRTHMNQADRVAPPEEYKCPISSRLMYDPVIIASGVTYERMWIRKWFNEGKTICPKTKKELPHMTLTPNIAMKDLISKWCKNNGVSIPDPSRHTEDFMLLDASITSIKSLGSYFNDLNLPMDLSNMSLGSLDNSFNSDVSQVKTNHDLNLMMIKSNENSHSQSHKHKVHAEIHDSDLMLLPKLHDLQWDSQCKVIEDLKDHMRSNSQAILSVSAENLVEPVVRFLSNANDLQDVKALRAGTQLLLEFVNNCRNGMANISEDTFIKLANLLDSEVIGEVLAIMEELSGDGNSKAKIAASNALTSVLKLLDSDNKGFQQQAIRTIYNLSFNSEVCPHMVSLNCIPKLLPFFEERAVLRYCIYILKNICDTEEGRNSVAETKGCITSIVEILESGSNEEQEHALEVLLSLCSCPQSVDYCKLILEENIITLAYISQNGNDKGKESALELIHLLRDAKHVDNEDRSSQPITNNSSTDSNNHTVENRSSKKSPFLKKIGLFSKSTSHASKTKR* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1126 769 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 347 IPR013083 -
Mal6g1126 769 Pfam Kinesin-associated protein (KAP) 498 661 - -
Mal6g1126 769 CDD RING-Ubox_PUB 278 320 IPR045210 -
Mal6g1126 769 SMART arm_5 549 589 IPR000225 GO:0005515
Mal6g1126 769 SMART arm_5 629 670 IPR000225 GO:0005515
Mal6g1126 769 SMART arm_5 590 628 IPR000225 GO:0005515
Mal6g1126 769 MobiDBLite consensus disorder prediction 723 744 - -
Mal6g1126 769 SUPERFAMILY ARM repeat 440 711 IPR016024 -
Mal6g1126 769 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 747 - -
Mal6g1126 769 PANTHER U BOX DOMAIN-CONTAINING 2 747 - -
Mal6g1126 769 MobiDBLite consensus disorder prediction 232 259 - -
Mal6g1126 769 ProSiteProfiles U-box domain profile. 273 347 IPR003613 GO:0004842|GO:0016567
Mal6g1126 769 SMART Ubox_2 277 340 IPR003613 GO:0004842|GO:0016567
Mal6g1126 769 Gene3D - 439 730 IPR011989 -
Mal6g1126 769 MobiDBLite consensus disorder prediction 718 752 - -
Mal6g1126 769 SUPERFAMILY RING/U-box 270 351 - -
Mal6g1126 769 Pfam U-box domain 275 344 IPR003613 GO:0004842|GO:0016567
Mal6g1126 769 MobiDBLite consensus disorder prediction 232 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1126 Mal-Chr6 17135075 17138828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1126 9 757 U-box Gene Family AT4G36550 36.089 2.92e-142 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1126 - - mtr:MTR_5g020570 1341.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1126 6 17135075 17138828 Mal6g1126 6 17135075 17138828 ECH
Mal6g1126 6 17135075 17138828 Mal5g3434 5 99157810 99166868 ECH
Mal6g1126 6 17135075 17138828 Mal5g3434 5 99157810 99166868 PCT