Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1117 ATGAATGACTTGATGACAAAATCGTTCCTAAGTTATGTGGAATTGAAGAAACAGGCACAGAAAGATTTTGAAGATGTTGACCTTGAACAAGGGAACCTCAACCCAACACAAGACCCTAACCTCTCTCAGTTCTTCCAAGAAGTTGAAGCAATCAAGGTTGAAATGCAAGAGATCACCAATCTCTTATTAGATCTTCAGCAACTGAATGAAGAGACAAAATCCACTCACAGTGCAAAAGTTCTTCGCGGGCTAAGAGACCGAATGGATTCTGATATGGTTGCCGTGCTGCGCAAGGCGAATATAATCAAGGCAAAGTTAGAGGCTCTTCAGAAATCCAATGTTGCGAATCGAAGCATATCAGAATGCTACAAAGAAGGAAGTCCTATTGATAGAACAAGAGTATCTGTCACAAATGGTTTGAAGGTCAAGCTTAGGGACATGATGAATGATTTTCAGTCCTTGAGGGATAAGATTGTGTTGGATCATAAGGAGGATTTGAAGAGAAGGTACTATACTGTGACGGGAGAGGTACCTAGCGATGAGGTTATGGAGAAGATGATATCAGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAAAACGGATGCTGATATGGGTACTCAGGTTAGGCATGAGGCTGTGATGGATATTCAAAGGAGTTTGAATAAGCTTCATCAGGTTTTTCTTGATATGGCTATTTTGGTTGAGACTCAAGGAGAAAAAGTGGATAACATTGAGGATAATGTGGTCAAAGCTGGTCACTACATTCATGGTGGAACTAGTAATCTTTACTATGCCAGCCAGATCAAGAAGAGGAACAGGAAATGGGTCTTATGGGTTATTGCTGTTTTGTTGATTGTACTGCTGGTGTGTTTCATTGCAATGTTGGCTTCTTGA 894 0.4094 MNDLMTKSFLSYVELKKQAQKDFEDVDLEQGNLNPTQDPNLSQFFQEVEAIKVEMQEITNLLLDLQQLNEETKSTHSAKVLRGLRDRMDSDMVAVLRKANIIKAKLEALQKSNVANRSISECYKEGSPIDRTRVSVTNGLKVKLRDMMNDFQSLRDKIVLDHKEDLKRRYYTVTGEVPSDEVMEKMISGSLKVEFLAGKTDADMGTQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKVDNIEDNVVKAGHYIHGGTSNLYYASQIKKRNRKWVLWVIAVLLIVLLVCFIAMLAS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1117 297 CDD SynN 41 191 IPR006011 GO:0016020
Mal6g1117 297 CDD SNARE_syntaxin1-like 207 262 - -
Mal6g1117 297 Gene3D - 36 169 - -
Mal6g1117 297 SMART tSNARE_6 198 265 IPR000727 -
Mal6g1117 297 Coils Coil 48 75 - -
Mal6g1117 297 SMART SynN_4 36 163 IPR006011 GO:0016020
Mal6g1117 297 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Mal6g1117 297 SUPERFAMILY t-snare proteins 38 258 IPR010989 GO:0016020|GO:0016192
Mal6g1117 297 Gene3D - 199 296 - -
Mal6g1117 297 PANTHER SYNTAXIN 3 293 IPR045242 -
Mal6g1117 297 PANTHER SYNTAXIN-112 3 293 - -
Mal6g1117 297 Pfam Syntaxin 43 238 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1117 Mal-Chr6 16990660 16991553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1117 1 297 SNARE and Associated Proteins AT2G18260 59.609 4.19e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1117 K08486 - gmx:112997615 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1117 6 16990660 16991553 Mal6g1117 6 16990660 16991553 ECH