Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1110 ATGGAGAAAACACAGCTAGATAATCTATTTCCTCTAACTCCAAGTTCCATATTCTCAACCAAGAAAGGACGTAGTGGATATGAACCATCAGACACAGAGACGGAGTGGCAAGAAACTCCGCGTCATGAACGAGGAAGAAAGAATAACATGACTTTGAGTCCTGAAGAAACAAAAGCTTTGTCTCTAAGGAACAAAAGTCCTATGTCACTCCACAAGAGACACCCTTCAAGGTTTGAATTTGAAGTCCCATCATCACCTTCAATAACAGGTTCAGTTCTTAACCAACCAAGAAGAAGACATCTCAGCAAATCACCCTATAGGCCACTACGCATAGCACATGATAATCATTATCATGACGATGGTAATAATCATGATGACGATGATTCTTCGTTAACATACATAACAGGTGTGAACTCGCGTAGAAATACAAGTCCTTTGCCGAGGCCTGACATTGGAAGAACAGTGTCTCCTTATAACAGAAATCATGAGCAAAGAACACCTTACAATGAGAGCAGAAAAGCAAGTTCAGGGCTTTTGGAAGTGGATAGAGTGAGTACGAAACAAAACTACCGGAGAGCAGTGACTGCTCCAAGATTGAGGGAGCAACAACAAACATCGCAAAACACAAGAATTCTGAAACAAAGGGAAAAATCTCCTTTTAAAACTGGTTTAGTTAGAGAAAGAGAAATCAATGAAATGATAGCACAGGTGAAGCTATCAAAAAACACCAATGATGATTATTCATCAGCACTAGAAAGTACAGACTCAATTCAAACAGGTGATCTTTTCTTTTCCCGCGAATGCAATGCCTTGCAAGGGAAGAATTCTCCATTGCCTAAAAAAGTTCAACAATATGGATATTTTAGCCCAAGACCAGTTATCACAAACCTTAATTCCATGGGAAACCAATCTGAAAGTTGTAACCTGAATATGAATAAGCCAAGAGCCTCTGCCAGTAATGTGATGTTGTCTCGAACATCGATGGCCACATCAATCAGAAAGGGAAGTGGAACTGGGAAGCCTAGTGCCAAGTCTAGTGTGAAAAGTGATGCTAGTACAAAGACAACTGAAAGCATGAGGAATTTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTGCTTGTATGATGAGATCAGGAAACTGTAGGATTTCAAGAAAATCGCCTGAGCGCAAACCAATTGACGAAGCTTCGTTGATTGAGAGGGCAATAATTGCGGAAAGCATTCCACAATTCTGGGCAGATAAACATCAACCAGCTTCACTCAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAAGAATTAGTATCACAGGGCTCTTGTCCTCATATTTTGCTCAAAGGACCCTCTGGTTCTGAGAAAAGAGAACTAGCAATGGCTTTTCTTCGAGAAATATTCGGCGATGCATGTTGTAATCTGTCACATGATTTAAGACATTTCCCTATTCAGGAAAAGAGGACTGTGAAAGTATCAGTTCCAATCACACACAGTTCTTATCACATGGAGCTCAATGTAAATTCAGAACCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCAGTTACCCCTGAAGTAAGCAATATGAATTTCAAGTCTGATTATAAAGTAATAATTCTTTACGATGTCGACAAAGCTGTTGAGAACATCCAGCACATGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAATTCTCTGCTGTGAAGATGATGAAAATATTATTGCACCTGTGAAAAACCGGTTCAAAGTTATCAATATTGATGCTCCTCAAACTCATGAAATTATTGAGGTTCTTACTCAGATAGCAAATAAAGAGGAAATCGATCTATCCGTGAATTTTGCTATGAAGATTGCAACAAAATCTAAGCAGAACCTCAGGGAAGCAATCTTGGCTCTTGAAGCATGCAGAGCACACAACTATCCATTTTCCGAAGAACAGCCGATTCCATTTAGATGGGAGAAGATTGTAACAGAAGTTGCTTTAGAGATCCTAGCCGATCCATCATTTTCACGCTTACTCTCAATAAGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCATCCCAGATTGATTCTCCTGAAACTTGTGGAGCAGCTCCTAAGAAGAATTGAGGATGGCTTAAAAAGGGAGCTCTATTATTGGCATGCTTACTATGACAGAAGACTCCCACCAGGAACAACAGCTTTACTAAAATTAGAAGAATTTGTGGCCAAGTTCATGAGCATATGCAGAAGAAGCTCAGGCAGTAGACAATATGTGTAG 2310 0.3918 MEKTQLDNLFPLTPSSIFSTKKGRSGYEPSDTETEWQETPRHERGRKNNMTLSPEETKALSLRNKSPMSLHKRHPSRFEFEVPSSPSITGSVLNQPRRRHLSKSPYRPLRIAHDNHYHDDGNNHDDDDSSLTYITGVNSRRNTSPLPRPDIGRTVSPYNRNHEQRTPYNESRKASSGLLEVDRVSTKQNYRRAVTAPRLREQQQTSQNTRILKQREKSPFKTGLVREREINEMIAQVKLSKNTNDDYSSALESTDSIQTGDLFFSRECNALQGKNSPLPKKVQQYGYFSPRPVITNLNSMGNQSESCNLNMNKPRASASNVMLSRTSMATSIRKGSGTGKPSAKSSVKSDASTKTTESMRNFTSNRKKNQKDAWFACMMRSGNCRISRKSPERKPIDEASLIERAIIAESIPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGPSGSEKRELAMAFLREIFGDACCNLSHDLRHFPIQEKRTVKVSVPITHSSYHMELNVNSEPNAKYALMGLIKEISNIYAVTPEVSNMNFKSDYKVIILYDVDKAVENIQHMIKWIIDRYSDICKLILCCEDDENIIAPVKNRFKVINIDAPQTHEIIEVLTQIANKEEIDLSVNFAMKIATKSKQNLREAILALEACRAHNYPFSEEQPIPFRWEKIVTEVALEILADPSFSRLLSIRGKFQMLLLDFVHPRLILLKLVEQLLRRIEDGLKRELYYWHAYYDRRLPPGTTALLKLEEFVAKFMSICRRSSGSRQYV* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1110 769 SUPERFAMILY post-AAA+ oligomerization domain-like 666 758 IPR008921 GO:0003677|GO:0006260
Mal6g1110 769 MobiDBLite consensus disorder prediction 1 25 - -
Mal6g1110 769 Gene3D - 413 604 IPR027417 -
Mal6g1110 769 MobiDBLite consensus disorder prediction 1 106 - -
Mal6g1110 769 Gene3D - 666 759 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 330 363 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 112 131 - -
Mal6g1110 769 Gene3D - 606 663 - -
Mal6g1110 769 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 215 768 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 26 51 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 82 98 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 330 365 - -
Mal6g1110 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 658 IPR027417 -
Mal6g1110 769 MobiDBLite consensus disorder prediction 137 209 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 112 127 - -
Mal6g1110 769 PANTHER OS02G0704966 PROTEIN 215 768 - -
Mal6g1110 769 MobiDBLite consensus disorder prediction 188 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1110 Mal-Chr6 16891324 16895368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1110 414 758 Core DNA Replication Machinery Family AT5G27740 37.644 9.14e-75 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1110 K10756 - gmx:100795321 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1110 6 16891324 16895368 Mal6g1110 6 16891324 16895368 ECH