Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1098 ATGCCTTCACCATCTTCAATTTTCTCAGCTTATGCATCCATGACAGCTTTGATCATGCTACTTCGTTCCATAGCTCACGAACTCATACCTCAACCAATTCGTGAATACCTTATCAACACTTTTCATTACCTCGTAAAACCACGTTCTACACTCACACTCATCATAGAAGAATCATCCGGCATAACTCGTAACGAAGTCTTCGATGCTGCAGAGACTTATCTCTCCACAAAAGTCACCCTTGAAAACGAAAGACTCAAAATTAGCAAAGCCCCAAAAGAGAAAAAACTCACAATTCGGTTAGAAAAAGGCGAAAAATTAACCGATATTTATAACGGGTTTGCGCTCATATGGAGATTCATTTGTGTTGAAACAGAGAAAAACAGTGCAAATGATATGCACAACAATAATAACAGTATATCTGTTAGATCAGAAAAAAATTATTTTGAACTTAGTTTTCACAAAAAGTATAAGGAAATAGTTTTCGAATCTTATCTTCCTTTTATTCTTGATAAAGCTAAAGAAATGAAAGATGAAGAAAGGGTGTTAAAAATGCATACTTTAGGTTCTACTTATTATGACGAAGGTGTGAAATGGGACTCTATAAACCTTGAACACCCTTCAACATTTGAAACACTTGCTATGGAACCAGAAATGAAGAATTTGATTATAAAAGATTTGAACATGTTTGTGAAGAGAAGGGAGTTTTATAAGAAAGTTGGTAAGGCTTGGAAACGTGGTTATTTGTTGTATGGTCCTCCTGGTACTGGAAAATCTAGTTTGATTGCTGCTATGGCTAATTATTTGAAGTTCGATATCTTTGATCTTCAACTTGGTACTGGTAACAATATTGTTAGAGATTCTTATCTTAGAAAGGTCCTTCTTGCTACTGCTAATAGGTCTATTTTGGTTATTGAAGATATTGATTGCAGTGTTGATATTCCTAAGAGGCATGGAGAAGGACGTAAACAAAATGATATACAGTTGACATTATCTGGATTACTGAACTTCATAGATGGATTATGGTCAAGTTGTGGAGACGAGAGAATCATCATATTTACAACAAACCACAAAGAAAAATTAGATCCAGCACTTTTAAGGCCAGGAAGAATGGACATACACATTCACATGACCTATTGTTCTTATGAAGGTTTCAAAATTTTGGCCTCAAATTACTTGGAAATTTCTCATGATAACCCCTTCTTTGGAGAGATTGAAGGACTAATAAAAGACATACAGATAACACCAGCACAAGTGGCAGGGGAATTGATGAAGAAAGAAGACGCGGAGGCGACACTTGAAGAATTTGTGAAATTACTTAAGCAGAAGAAGATGGCCGGTTGA 1341 0.3565 MPSPSSIFSAYASMTALIMLLRSIAHELIPQPIREYLINTFHYLVKPRSTLTLIIEESSGITRNEVFDAAETYLSTKVTLENERLKISKAPKEKKLTIRLEKGEKLTDIYNGFALIWRFICVETEKNSANDMHNNNNSISVRSEKNYFELSFHKKYKEIVFESYLPFILDKAKEMKDEERVLKMHTLGSTYYDEGVKWDSINLEHPSTFETLAMEPEMKNLIIKDLNMFVKRREFYKKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLGTGNNIVRDSYLRKVLLATANRSILVIEDIDCSVDIPKRHGEGRKQNDIQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKEKLDPALLRPGRMDIHIHMTYCSYEGFKILASNYLEISHDNPFFGEIEGLIKDIQITPAQVAGELMKKEDAEATLEEFVKLLKQKKMAG* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1098 446 Coils Coil 425 445 - -
Mal6g1098 446 Pfam Domain associated at C-terminal with AAA 29 120 IPR025753 -
Mal6g1098 446 PANTHER BCS1 AAA-TYPE ATPASE 1 443 - -
Mal6g1098 446 PANTHER BNAA10G17020D PROTEIN 1 443 - -
Mal6g1098 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 427 IPR027417 -
Mal6g1098 446 Pfam ATPase family associated with various cellular activities (AAA) 248 377 IPR003959 GO:0005524|GO:0016887
Mal6g1098 446 CDD AAA 244 378 - -
Mal6g1098 446 Gene3D - 196 374 IPR027417 -
Mal6g1098 446 SMART AAA_5 243 380 IPR003593 -
Mal6g1098 446 ProSitePatterns AAA-protein family signature. 348 366 IPR003960 GO:0005524|GO:0016887
Mal6g1098 446 Gene3D - 375 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1098 Mal-Chr6 16679127 16683472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1098 245 376 Calmodulin-binding Proteins AT3G56690 31.429 4.62e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1098 - - gmx:100789621 706.057