Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1094 ATGAGAACCCCTATGGTTGGTCGTTTCTCTTCATCATTCACAAACATTGGTTCAGCGTCATCATGGTTCGAGGTATATGCTGCCTTCTCCACTTTCATGGTGCTTTTAAGAACCGCAATCAATGATCTCATACCCTTAAAACTTAGAAATTTCATCATCTCAAAGCTAAAACGTTTCTTCACAGATTACCAACCCAATAACCAAGTTTCACTTCAAATCGACCAGTTTTGGGATGGAAGTACTAACCATCTCTTCTATGCAGCCAAAGAGTATATCCCTACAAAAATATCCAACACTTACAAATCCCTCAAAGTTGGAAAAATATCCAAACATAACAACATAGTTTTAGCTTTTGATGGAAAACAAGTAGTGGTTGATGAATTTGAAGATATCAAGCTTAAATGGAAACTTATTGAAAATTCCAACAATGATGATCTTATTGAAACTCCCAAAAAGGAATATAATAAGCATAAATCAAGAGACTATGAAGAAAGTGGGTTTATGTTAAGTTTTGATGAAAAACATAGAGATAAAGTAATGGAGAAGTATATTCCACATGTTTTAAGCACTTATGAGGCTATAAAAGCAGGAAATAAAACTCTCAAGATTCATTCCATGCAATCTGGACCATGGAAACAAAGTGATTTAACACATCCTGCTTCATTTGATTCACTTGCTATGGATCCTGATCTAAAGAAAGCTATAATTGATGATTTAGATAGATTTTTGAGGAGGAAAAAGTTGTATAAAAAAGTTGGTAAGCCATGGAAACGTGGTTACTTATTGTATGGTCCACCAGGAACAGGAAAATCTAGTCTTATTGCAGCTATGGCAAAATACTTGAAATTTGATGTCTATGATTTGGATCTAAGTTCAGTGTATTCTAACTCAGAACTTATGAGAGCTATGAGAGAGACATCAAACAGATCTATCATTGTTTTTGAAGACATTGACTGCAATTCAGAGGTGCTTGATCGATCAAAACCAGACAAGTTTCCAGATATGGATTTTTTAGACGGGGTTAAGGTGGTTAAGAACATGCCTAGAAAGTTTACTCTATCAGGTCTTCTTAACTATATGGATGGTTTGTGGTCAAGTTGTGGAGAGGAACGAATTTTAATATTTACAACAAATCATAAAGACAAAGTAGATTCAGCATTGTTGCGCCCTGGTCGTATGGACATGCATATTCACTTGTCCTATCTTAAAGCAAAGGCATTCAGAATCTTAGCTTCTAATTATTTGGACATTGAAGGAAATGATCACTCACTCTTTGAGCAAATTGAAGAGTTATTGGAAAAAGTAGATGTCACCCCTGCAGTAGTGGCAGAGTATCTATTGAGAAGTGAGGATCCTGATGTTGCTCTTGGAGCACTTGTTAAATTTCTTCAAGACATTGACATTTCAAAAGTTATTGTGGATGAAGAGTAA 1431 0.3529 MRTPMVGRFSSSFTNIGSASSWFEVYAAFSTFMVLLRTAINDLIPLKLRNFIISKLKRFFTDYQPNNQVSLQIDQFWDGSTNHLFYAAKEYIPTKISNTYKSLKVGKISKHNNIVLAFDGKQVVVDEFEDIKLKWKLIENSNNDDLIETPKKEYNKHKSRDYEESGFMLSFDEKHRDKVMEKYIPHVLSTYEAIKAGNKTLKIHSMQSGPWKQSDLTHPASFDSLAMDPDLKKAIIDDLDRFLRRKKLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYDLDLSSVYSNSELMRAMRETSNRSIIVFEDIDCNSEVLDRSKPDKFPDMDFLDGVKVVKNMPRKFTLSGLLNYMDGLWSSCGEERILIFTTNHKDKVDSALLRPGRMDMHIHLSYLKAKAFRILASNYLDIEGNDHSLFEQIEELLEKVDVTPAVVAEYLLRSEDPDVALGALVKFLQDIDISKVIVDEE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1094 476 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 471 - -
Mal6g1094 476 Pfam Domain associated at C-terminal with AAA 44 138 IPR025753 -
Mal6g1094 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 450 IPR027417 -
Mal6g1094 476 Pfam ATPase family associated with various cellular activities (AAA) 261 400 IPR003959 GO:0005524|GO:0016887
Mal6g1094 476 Gene3D - 398 467 - -
Mal6g1094 476 PANTHER BCS1 AAA-TYPE ATPASE 15 471 - -
Mal6g1094 476 Gene3D - 213 397 IPR027417 -
Mal6g1094 476 SMART AAA_5 256 403 IPR003593 -
Mal6g1094 476 CDD AAA 257 401 - -
Mal6g1094 476 ProSitePatterns AAA-protein family signature. 371 389 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1094 Mal-Chr6 16609694 16612747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1094 258 431 Calmodulin-binding Proteins AT3G56690 27.568 7.74e-10 59.7