Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1093 ATGCAGCTTTGGGATGGAAGTAGCAACAATCTTTTCTATGCAGCCAAAGAGTATCTCCCTACTAGAATATCCAAAACTTACAAATCCCTCAAAGTTGGGAAAATACCTGATCACAACAATGTTCTAGTAGCTTTTGATGGAAAGGAAGAAGTGGTGGATGAATATGAAGGCATCAAGATCAAATGGATTCTTATTCAGAAAACCAACAATGGTCTTGAAAATCCCGATGATGAAATATATAAGAAATTATATAAGCATAAGCCAAATGAATCTGAGGAGAATCGGTTTGTGTTAAGTTTTGATGAGAAGCATAGAGAGAAAGTAATGGAAAATTATATTCCACATGTTTTAAGCACTTATGAGGATATACAAGCACAACATAAGACTCTTAAGATCTATTCAATGCAAAGTGGACCTTGGAAACATAGTAGTTTTACACATCCAGCTTCATTTGATTCACTTGCATTGGATCCTGATCTAAAGAAAGCTATAGTTGATGATTTAGAACGGTTTTTGAGGAGGAAAAAGTTTTATCAACAAGTTGGTAAGCCTTGGAAACGTGGTTACTTATTGTATGGGCCACCAGGGACAGGAAAATCTAGCCTTATTGCTGCTATGGCAAAGTATTTGAAGTTTGATGTCTATGATTTGGATTTAAGCTTGGTGGTTTGTAACTCACAACTCATGAAAATCATGAGGGCCACATCCAACAGATCCATCATTGTTATTGAAGACATTGACTGCCATAAAGTAGTGCATGATCGATCAAAACCAGATATGGATTCAGACTCTAAGGTTAATTGCACGCCCCCGCCGACTCAGGATCTTGGACACGCCGCTCCTAAAAGGTTTACTCTATCAGGTCTTCTTAACTATATGGATGGTTTGTGGTCAAGTTGCGGAGAGGAACGAATTTTGGTATTTACTACAAACCATAAAGAGAAAGTAGATCCGGCATTGTTGCGCCCTGGTCGTATGGACATGCATATTCACTTGTCCTTTCTTAAAGCCAAGGCATTCAGAGTCTTAGCTTCTAATTATTTGGACATTGAAGAACATCATCATCCACTATTTGAGCAAATTGAAGAGCTACTGGAAAAAGTAGAGGTCACCCCTGCAGTAGTGGCAGAGCATCTGTTGAGAAGTGAGGATCCTAATGTTGCTATTGGAGCACTTATTAAATTTCTTCAAGAAATTGACACTTCAAGAGGGAATGAAGACTTTGGTCAGCAAGTTTAG 1239 0.3834 MQLWDGSSNNLFYAAKEYLPTRISKTYKSLKVGKIPDHNNVLVAFDGKEEVVDEYEGIKIKWILIQKTNNGLENPDDEIYKKLYKHKPNESEENRFVLSFDEKHREKVMENYIPHVLSTYEDIQAQHKTLKIYSMQSGPWKHSSFTHPASFDSLALDPDLKKAIVDDLERFLRRKKFYQQVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYDLDLSLVVCNSQLMKIMRATSNRSIIVIEDIDCHKVVHDRSKPDMDSDSKVNCTPPPTQDLGHAAPKRFTLSGLLNYMDGLWSSCGEERILVFTTNHKEKVDPALLRPGRMDMHIHLSFLKAKAFRVLASNYLDIEEHHHPLFEQIEELLEKVEVTPAVVAEHLLRSEDPNVAIGALIKFLQEIDTSRGNEDFGQQV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1093 412 PANTHER BCS1 AAA-TYPE ATPASE 16 404 - -
Mal6g1093 412 CDD AAA 186 333 - -
Mal6g1093 412 SMART AAA_5 185 336 IPR003593 -
Mal6g1093 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 386 IPR027417 -
Mal6g1093 412 Gene3D - 331 400 - -
Mal6g1093 412 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 16 404 - -
Mal6g1093 412 Gene3D - 143 330 IPR027417 -
Mal6g1093 412 Pfam Domain associated at C-terminal with AAA 7 65 IPR025753 -
Mal6g1093 412 Pfam ATPase family associated with various cellular activities (AAA) 190 249 IPR003959 GO:0005524|GO:0016887
Mal6g1093 412 Pfam ATPase family associated with various cellular activities (AAA) 284 332 IPR003959 GO:0005524|GO:0016887
Mal6g1093 412 ProSitePatterns AAA-protein family signature. 304 322 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1093 Mal-Chr6 16579201 16582425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1093 187 332 Calmodulin-binding Proteins AT3G56690 25.974 8.04e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1093 - K08900 gmx:100787726 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1093 6 16579201 16582425 Mal6g1093 6 16579201 16582425 ECH