Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1083 ATGGCTGGTTTATTTTCATTAGGAAGTAGTGGAGGAAGAAACGAAGTAGAAGAAAATCAACATAATAATCCAACAACGGAATTCTGGTTTACCAACAAAAATGATGAGTCTGTTGTTTCAGCATACCGTGGTTTTGAGATTTGGAACCAGCAGCAACAACATCAGTTTTTGTCTTTACAACAGCAGCAACAAGATCTTTATTCTTCTGGTGTTGTGTTAGGAGTTGGACCAAGTAGGGTTTCTAATTGTTCAGATGAGAATAGATCTGCGGCGGGGTTTGTTGCGGCGACGGCGTCGGGAAGTGGTGGAGGGATAAGTTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTCCTCATATGAGGTGTAGGACTTGTTGTAAAAGTAGAGGTTTTGATTGTCAAACTCATGTTAAGAGTACTTGGGTTCCTGCTTCTAGAAGAAGAGAAAGACAACAACAACAACAACATCAACAACATGTAGCTGTTACAAAACAACATGGAGATGGAGATCTTAATAACAACCAACAAATTACCTCTAATTCTACTCTAGCTTGCACTCGTTTACCTACAAACCCTTCACTCACTATCCCTTCAGCAGGGTTTTTAGAGGAGGTGAATTTTCCAGCCGTGGTGAATTCTCCAGCAGAGTTTAGGTGTGTGAAAGTTAGCTCAGTTGATGAGCCTGAAGAAGAGTATGCATATTCAACTGCTGTAAACATTGGAGGACATATTTTCAGAGGAATTTTGTATGACTATGGTCCAGATCATGGTAATAATAGTTACAATATGGCTGCCGGAAACACCTCTTCCAGTGGCGGTGAAGCGGCGGTGCAGCCCTTAAACCTTATCTCAGCTGTCCCTGCAACTGCAGTTGGGGAAATTGTTGATCCTTCTTCTTTGTATCCAGCTCCAATTAATTCCTTCATGCCTTCTAGTGGTACGCAATTCTTCCCCCACCCAAGATCTTGA 972 0.4177 MAGLFSLGSSGGRNEVEENQHNNPTTEFWFTNKNDESVVSAYRGFEIWNQQQQHQFLSLQQQQQDLYSSGVVLGVGPSRVSNCSDENRSAAGFVAATASGSGGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQQQQQHQQHVAVTKQHGDGDLNNNQQITSNSTLACTRLPTNPSLTIPSAGFLEEVNFPAVVNSPAEFRCVKVSSVDEPEEEYAYSTAVNIGGHIFRGILYDYGPDHGNNSYNMAAGNTSSSGGEAAVQPLNLISAVPATAVGEIVDPSSLYPAPINSFMPSSGTQFFPHPRS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1083 323 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 106 148 IPR006510 -
Mal6g1083 323 Pfam Domain of unknown function (DUF702) 104 256 - -
Mal6g1083 323 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 1 323 - -
Mal6g1083 323 MobiDBLite consensus disorder prediction 1 26 - -
Mal6g1083 323 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 208 255 IPR006511 -
Mal6g1083 323 MobiDBLite consensus disorder prediction 12 26 - -
Mal6g1083 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 323 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1083 Mal-Chr6 16499859 16501387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1083 1 310 C2H2 Transcription Factor Family AT5G66350 46.264 8.09e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal6g1083 DUF702 4.8e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1083 - - gmx:100814589 319.316