Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1060 ATGCGAACGCTTTGTGATGCTTGTGAGAGTGCTGCCGCCATCGTTTTCTGTGCTGCTGATGAGGCTGCACTCTGTCGTGCTTGTGATGAGAAGGTTCATATGTGCAATAAGCTAGCTAGTAGACATGTTAGGGTCGGTCTTGCAAGTCCAAGTGACGTGCCGCGGTGTGACATATGTGAGAATGCACCTGCTTTCTTCTATTGCGAAACAGATGGAAGTTCCCTTTGTTTGCAATGTGATATGATAGTTCATGTTGGTGGTAAAAGAACACATGGAAGATATCTTCTGTTTAGGCAAAGAGTTGAGTTTCCAGGCGATAAACCTAGTAATGCAGACAACCCAGCTTCACAACCTCTAGATCCAGGTGATATTAAAAGAGTACAAAGTCCGCTTCCTAAACTAAAAATGGGAGAGAAGCAACAAAATCATAGGGTGCCTCCGGTTCCAAATTCAGAACCTGATGCTGGTGGGAATACCAAGATGGACAATAAATTGATTGATTTGAACATGAAGCCTAACAACAGAATACATGAACATGCATCAAATAATCAGCCATAG 558 0.4301 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKPSNADNPASQPLDPGDIKRVQSPLPKLKMGEKQQNHRVPPVPNSEPDAGGNTKMDNKLIDLNMKPNNRIHEHASNNQP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1060 185 CDD Bbox1_BBX-like 4 47 - -
Mal6g1060 185 PANTHER SALT TOLERANCE-LIKE PROTEIN 1 184 - -
Mal6g1060 185 SMART bboxneu5 51 96 IPR000315 GO:0008270
Mal6g1060 185 SMART bboxneu5 1 47 IPR000315 GO:0008270
Mal6g1060 185 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Mal6g1060 185 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 184 - -
Mal6g1060 185 CDD Bbox1_BBX-like 56 96 - -
Mal6g1060 185 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mal6g1060 185 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Mal6g1060 185 Gene3D Classic Zinc Finger 2 91 - -
Mal6g1060 185 MobiDBLite consensus disorder prediction 105 185 - -
Mal6g1060 185 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Mal6g1060 185 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1060 Mal-Chr6 15958945 15961228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1060 1 183 C2C2-CO-like Transcription Factor Family AT4G38960 62.842 4.65e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mal6g1060 zf-B_box 2.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1060 6 15958945 15961228 Mal6g1060 6 15958945 15961228 ECH
Mal7g2607 7 87920695 87921581 Mal6g1060 6 15958945 15961228 ECH