Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1054 ATGCATAAACTTCTCTTCATTCTCTTACTCTGCGCACCATTCTTATCCTACGCCGTAACCGTCACCGAGATCCAATCCCTAACCTCCTTCAAGCTCAACCTCCATGATCCTCTCGGCGCTCTCGACGGTTGGGATCCATCTTCACCGCAAGCACCATGCGACTGGCGCGGCGTTTCTTGCAACAACCACCATGTCACGGAGCTTCGTCTCCCTCGTCTTCAACTCGCCGGTAGACTCAGTGAACATCTTGGTGAGTTACGCATGTTGAAGAAGATAAGCCTCCGTTCGAATTTCTTCAACGGAACCATTCCAAGAACGCTTTCGCAATGCAAGGTTTTACGGTTCTTGTTCTTGCAGGATAATCAATTTTCCGGTGAAATTCCGCCGGAGATCGGAAACCTCACCGGTCTTCAGATTCTTAACGTTGCACAGAATCATCTCACCGGAACTGTTCCTAACAACCTTCCGGTAGGTCTCAAGTACCTTGACCTATCGTCGAATGCTTTCTCCGGTGAGATTCCGGTGACCGTTGGTAATTTATCTCTTCTTCAACTTATCAACTTTTCGTTTAATCAATTCTCCGGTGAGATTCCAGCGAGGTTTGGTGAGCTTCAGAAACTGCAGTATCTATGGCTTGATCATAATTTCTTTGGTGGAACATTACCTTCTGCACTTGCGAATTGTTCTTCGCTTGTGCATTTGAGTGCTGAAGGAAATTCACTTTCCGGCGTGATTCCGGCGGCGATTTCGGCGCTTCCGATGCTTCAGGTGATGTCACTTTCTCAGAATAATCTTACCGGTTCAATTCCTGCCTCGGTTTTCTGTAATGTTTCTGTTCACGCGCCGTCGTTGAGGATAGTTCAACTTGGATTCAATGGTTTCACGGATTTCGTTGTAGTTGAAACCAACACGTGTTATAGTGTTCTTCAGGTTTTGGATATTCAACACAATAGCATAAGAGGCACGTTTCCCTTGTGGTTAACCAATGTAACCACGTTGTCAGTGCTTGATCTTTCGAACAATAAACTTTCCGGTGAGATTCCGCGGCAAATAGGAAATCTTGCCAGGTTGACAGAGTTGAAGGTGGCTAATAATTCATTCACCGCTGTTATTCCGGTGGAAATCGAGAAATGTGGGTCCCTCAATGTTGTTGATTTTGAAGGAAACAATTTCGCCGGAGAAGTTCCTTCGTTTTTCGGCGATATGAAGGGACTTAAGGCTTTATCTCTTGGTGGAAATCGCTTCTTTGGTTCAGTTCCTGTGAGTTTTGGTAACCTTTCTTTACTTGAAACCTTAAGTTTGAGAAGTAATAGATTAAATGGAACTATGCCTGAGGTGATAATGAGTTTGAGCAATTTGACAACACTGGATCTTAGTAATAACAAGTTTACTGGTGAAATTTATGATAGTATTGGGAAATTGAATCGATTAATGGTTCTTAATTTGAGTGGAAATGGCTTCTCTGGAAAAATTCCTTCTAGTTTGGGAACTCTTTTCAGGCTAACTACACTTGATTTGAGCAAACAGAATCTCTCTGGAGAGTTACCGTTTGAGCTCTCTGGGTTGCCCAATCTGCAGGTTATTGCTTTGCAGGAGAATAAGCTATCTGGGGTGGTGCCTGAAGGGTTCAGCAGTTTGATGAGTTTACAGTATGTGAACCTTAGCTATAATGCTTTTTCTGGGCATATTCCTGAGAACTATGGTTATCTTCGATCGTTGGTTGTTCTCTCGTTGTCTCATAATCACATTACAGGAACAATTCCTTCAGAAATTGGAAACAGTTCTGATATTGAAATTCTTGAGCTTAGATCGAATTCATTGGCAGGTCATATACCTACCGAGCTCTCTCGCCTCACCCATTTGAAAGTGCTTGATTTGGGTGGCAACAATTTAAATGGGGATATGCCTGAGGATATCTCCAAATGTTTGTCATTAACCACATTGTTAGTAGATCACAACAATCTTGCAGGTGCCATACCAGGGTCATTGTCGAATCTATCAAAGCTAACAATGCTGGATCTCTCTGCTAACAATTTGAGTGGTGAAATTCCTAGCAATTTTTCTATGATCCCTGATTTGGTGTATTTCAATGTGTCGGGGAACAATTTGGAAGGTGAGATACCGCAAACTTTGGGATCACGGTTCAACAACCCTTCCGTGTTTGCTGATAATCAAGGTTTATGTGGAAAGCCTTTGGATTCGAAGTGTGAAGGTACAAACAATAGGGACAAAAAGAGGTTGATAGTGTTGATTATCATCATTGCAATAGGAGCTTGCATATTAGTCCTGTTTTGTTGTTTTTACATCATCGGCTTATGGAGATGGCGGAAGAGGCTCAAAGAAAAGGTTTCTGGGGAGAAGAAAAAGAGTCCTGCAAGAGCAAGTTCAGGAGCAAGTGGAGGCCGTAGTAGCAGTGAAAATGGAGGGCCAAAACTCGTGATGTTCAACACCAAAATCACACTTGCTGAAACAATCGAAGCAACAAGACAGTTTGACGAAGAAAATGTACTTAGCCGAACAAGGTATGGATTAGTATTCAAAGCTTGCTACAATGATGGAATGGTCCTTTCCATTCGCCGGCTCCCTGATGGATCATTAGATGAGAACATGTTCAGAAAAGAAGCTGAGTCACTAGGCAAAATAAAGCACCGAAATTTAACAGTTCTAAGAGGATACTATGCAGGACCACCTGATATGAGACTCTTGGCCTACGATTACATGCCCAATGGAAACCTTGCAACACTCCTCCAAGAAGCTTCTCACCAAGATGGTCATGTTCTGAATTGGCCAATGAGACACCTCATTGCACTTGGAATCGCCCGTGGATTAGCCTTCATACACCAATCCACAATGGTCCACGGCGACGTAAAACCTCAAAACGTTTTATTCGACGCAGATTTCGAAGCCCATTTATCAGATTTCGGGTTAGAAAGACTAACAGTACCCACATCAGGAGAAGCAGCCTCCACTTCAACATCAGTTGGCACTTTAGGCTACGTTTCACCCGAAGCAATCTTAACCAGCGAAATCACAAAAGAATCCGATGTTTACAGCTTTGGCATTGTGTTGTTGGAACTTCTAACAGGAAAGAGACCAGTAATGTTCACACAAGATGAAGATATAGTAAAGTGGGTGAAAAAACAACTTCAAAGGGGTCAAATAACAGAGCTGTTAGAACCTGGTTTACTTGAACTAGACCCAGAATCATCAGAATGGGAAGAGTTTTTACTAGGTGTGAAAGTTGGTTTACTTTGCACAGCACCAGATCCTCTTGATCGACCAACTATGTCCGACATTGTTTTCATGCTCGAAGGTTGTCGTGTTGGTCCTGATGTCCCATCCTCAGCTGATCCCACCTCTCAACATTCTCCAGCATAA 3378 0.4304 MHKLLFILLLCAPFLSYAVTVTEIQSLTSFKLNLHDPLGALDGWDPSSPQAPCDWRGVSCNNHHVTELRLPRLQLAGRLSEHLGELRMLKKISLRSNFFNGTIPRTLSQCKVLRFLFLQDNQFSGEIPPEIGNLTGLQILNVAQNHLTGTVPNNLPVGLKYLDLSSNAFSGEIPVTVGNLSLLQLINFSFNQFSGEIPARFGELQKLQYLWLDHNFFGGTLPSALANCSSLVHLSAEGNSLSGVIPAAISALPMLQVMSLSQNNLTGSIPASVFCNVSVHAPSLRIVQLGFNGFTDFVVVETNTCYSVLQVLDIQHNSIRGTFPLWLTNVTTLSVLDLSNNKLSGEIPRQIGNLARLTELKVANNSFTAVIPVEIEKCGSLNVVDFEGNNFAGEVPSFFGDMKGLKALSLGGNRFFGSVPVSFGNLSLLETLSLRSNRLNGTMPEVIMSLSNLTTLDLSNNKFTGEIYDSIGKLNRLMVLNLSGNGFSGKIPSSLGTLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGVVPEGFSSLMSLQYVNLSYNAFSGHIPENYGYLRSLVVLSLSHNHITGTIPSEIGNSSDIEILELRSNSLAGHIPTELSRLTHLKVLDLGGNNLNGDMPEDISKCLSLTTLLVDHNNLAGAIPGSLSNLSKLTMLDLSANNLSGEIPSNFSMIPDLVYFNVSGNNLEGEIPQTLGSRFNNPSVFADNQGLCGKPLDSKCEGTNNRDKKRLIVLIIIIAIGACILVLFCCFYIIGLWRWRKRLKEKVSGEKKKSPARASSGASGGRSSSENGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAESLGKIKHRNLTVLRGYYAGPPDMRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFIHQSTMVHGDVKPQNVLFDADFEAHLSDFGLERLTVPTSGEAASTSTSVGTLGYVSPEAILTSEITKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDVPSSADPTSQHSPA* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1054 1125 SUPERFAMILY Protein kinase-like (PK-like) 809 1113 IPR011009 -
Mal6g1054 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 951 963 IPR008271 GO:0004672|GO:0006468
Mal6g1054 1125 Gene3D Phosphorylase Kinase; domain 1 801 906 - -
Mal6g1054 1125 Gene3D Ribonuclease Inhibitor 349 446 IPR032675 -
Mal6g1054 1125 Gene3D Ribonuclease Inhibitor 245 348 IPR032675 -
Mal6g1054 1125 Gene3D Transferase(Phosphotransferase) domain 1 907 1111 - -
Mal6g1054 1125 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Mal6g1054 1125 Gene3D Ribonuclease Inhibitor 157 244 IPR032675 -
Mal6g1054 1125 MobiDBLite consensus disorder prediction 786 811 - -
Mal6g1054 1125 Gene3D Ribonuclease Inhibitor 447 740 IPR032675 -
Mal6g1054 1125 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1121 - -
Mal6g1054 1125 PRINTS Leucine-rich repeat signature 333 346 - -
Mal6g1054 1125 PRINTS Leucine-rich repeat signature 450 463 - -
Mal6g1054 1125 MobiDBLite consensus disorder prediction 796 811 - -
Mal6g1054 1125 SMART LRR_sd22_2 618 641 - -
Mal6g1054 1125 SMART LRR_sd22_2 666 689 - -
Mal6g1054 1125 SMART LRR_sd22_2 330 356 - -
Mal6g1054 1125 SMART LRR_sd22_2 570 593 - -
Mal6g1054 1125 SMART LRR_sd22_2 426 452 - -
Mal6g1054 1125 Pfam Leucine rich repeat 500 558 IPR001611 GO:0005515
Mal6g1054 1125 Pfam Leucine rich repeat 429 486 IPR001611 GO:0005515
Mal6g1054 1125 Pfam Leucine rich repeat 309 366 IPR001611 GO:0005515
Mal6g1054 1125 Pfam Leucine rich repeat 644 703 IPR001611 GO:0005515
Mal6g1054 1125 Pfam Leucine rich repeat 571 631 IPR001611 GO:0005515
Mal6g1054 1125 SMART LRR_typ_2 570 594 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 204 228 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 522 545 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 474 498 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 450 470 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 330 354 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 666 689 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 618 642 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 402 425 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 252 276 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 134 158 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 426 449 IPR003591 -
Mal6g1054 1125 SMART LRR_typ_2 86 110 IPR003591 -
Mal6g1054 1125 SMART serkin_6 831 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1054 1125 ProSiteProfiles Protein kinase domain profile. 831 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1054 1125 SUPERFAMILY RNI-like 60 391 - -
Mal6g1054 1125 Pfam Protein kinase domain 841 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1054 1125 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 5 1121 - -
Mal6g1054 1125 SUPERFAMILY RNI-like 395 713 - -
Mal6g1054 1125 Gene3D Ribonuclease Inhibitor 20 156 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1054 Mal-Chr6 15824951 15828328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1054 4 1125 Receptor kinase-like Gene Family AT4G36180 67.665 0.0 1479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Mal6g1054 Pkinase 5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1054 - - gmx:100795838 1796.94