Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1046 ATGGAGTCCATGGAGTCATGTGTCCCACCAGGCTTTCGCTTCCATCCAACCGATGAAGAACTTGTTGGTTATTATCTCAGAAAGAAAATTGCTTCTCAGAAAATTGACCTAGATGTTATCAGAGAGATCGATCTTTATCGTATCGAACCATGGGATCTTCAAGAGAGATGCAGGATAGGGTATGAAGAGCAGAATGAGTGGTATTTTTTCAGCCACAAAGATAAAAAGTATCCAACCGGAACAAGAACTAACAGAGCTACCATGGCTGGGTTTTGGAAAGCTACAGGAAGAGATAAAGCAGTTTATGACAAGATGAAACTAATTGGAATGAGGAAGACTCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAATCTGATTGGATCATGCATGAATATAGGCTTGAATCTGATGAAAATGGACCTCCACAGGAGGAAGGATGGGTAGTGTGTAGAGCATTTAAGAAAAGAACAACAAATAGCCAAAGTACAAAAAGTACTATTGAAGGATGGGACACAAGCTACTTCTTTGAAGAATCCTCAAGTAGGGTCAACAATTCCATGGTGGATCCAATTGATCAACTAATCTCAAGGCAACCTCAAAGCTATTTATCTCAAAGTTATAACATGTGTAAGCAAGAGATAGAAGCATGCATGCATGCAGAACAATTTGTACAGCTTCCTCAGCTTGAAAGTCCTTCATTGCCATTAGCAAAGAGACCAAGCACAATGTCTCTAGTATCCGACAATAATAACGATGATTTTGCTACAAATACAGTTACTGATTGGAGAGCTCTTGATAAATTTGTGGCTTCTCAACTGAGTCATGAAGTTGAAACTGATCAAGAAGTGTTGTTGTCAAGTTTTGGAGCAAATAATAATAATGCTAGCTCGGATATGGCATTGATGTTACTTCAGCAAGGTAGTAGGGATGAAGGGAACAAGTTAAGTCCGTTTTTGAATGCAAGTTCAGATTGCAGTGATATTGGGATATGCGTATTTGAAAAATGA 1014 0.3895 MESMESCVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNSQSTKSTIEGWDTSYFFEESSSRVNNSMVDPIDQLISRQPQSYLSQSYNMCKQEIEACMHAEQFVQLPQLESPSLPLAKRPSTMSLVSDNNNDDFATNTVTDWRALDKFVASQLSHEVETDQEVLLSSFGANNNNASSDMALMLLQQGSRDEGNKLSPFLNASSDCSDIGICVFEK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1046 337 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Mal6g1046 337 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Mal6g1046 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 312 - -
Mal6g1046 337 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Mal6g1046 337 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Mal6g1046 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1046 Mal-Chr6 15720750 15723562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1046 1 336 NAC Transcription Factor Family AT2G18060 61.538 3.41e-151 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g1046 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1046 - - aprc:113869508 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1046 6 15720750 15723562 Mal6g1046 6 15720750 15723562 ECH
Mal6g1046 6 15720750 15723562 Mal5g3352 5 97286628 97290614 PCT