Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1023 ATGCTCTCTTCAATATCTCTTCCTTCTTCTCTCTTCGTTGCCGGAAACTTCTCCGGCACCACCGTAACACCACCGCCGTGTCGTGTCAGATCGAAGCCAATAATCACCAGCGCTACAGCAACCGCCGAAGCTCGTTCTACATGGACGGAGCAACAAAGACCTTCGTATCTGAACATGAACACTTCTCACTCTTCTCCGGCATCGCTTTACGAGATCCTCGGTATATCAGCAGGTGCTTCGAATCAAGAGATTAAATCAGCGTACCGGCGACTTGCTAGAGTATGCCACCCTGATGTGGCGGCGATTGATCGGAAAAACTCGTCTGCTGATGATTTCATGAAGATTCACACAGCTTACTCGACGTTATCTGATCCTGAAACACGTGCTAATTATGATCGGAGTCTTTTCCGGCGACAACGGCCGTTGTCGTCGATGGTGTCTTCCGGCTACTCGAGTCGAAAATGGGAAACGGATCAGTGTTGGTAG 486 0.4979 MLSSISLPSSLFVAGNFSGTTVTPPPCRVRSKPIITSATATAEARSTWTEQQRPSYLNMNTSHSSPASLYEILGISAGASNQEIKSAYRRLARVCHPDVAAIDRKNSSADDFMKIHTAYSTLSDPETRANYDRSLFRRQRPLSSMVSSGYSSRKWETDQCW* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1023 161 CDD DnaJ 70 124 IPR001623 -
Mal6g1023 161 SUPERFAMILY Chaperone J-domain 42 131 IPR036869 -
Mal6g1023 161 SMART dnaj_3 67 127 IPR001623 -
Mal6g1023 161 PANTHER - 1 161 - -
Mal6g1023 161 PRINTS DnaJ domain signature 107 127 IPR001623 -
Mal6g1023 161 PRINTS DnaJ domain signature 70 88 IPR001623 -
Mal6g1023 161 PRINTS DnaJ domain signature 88 103 IPR001623 -
Mal6g1023 161 Pfam DnaJ domain 69 132 IPR001623 -
Mal6g1023 161 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Mal6g1023 161 Gene3D DnaJ domain 55 155 IPR036869 -
Mal6g1023 161 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 161 - -
Mal6g1023 161 ProSiteProfiles dnaJ domain profile. 68 135 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1023 Mal-Chr6 15292391 15292876 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1023 60 132 C2H2 Transcription Factor Family AT1G74250 42.857 2.39e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1023 - - gmx:100800959 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1023 6 15292391 15292876 Mal6g1023 6 15292391 15292876 ECH
Mal6g1023 6 15292391 15292876 Mal5g3333 5 96925560 96926009 ECH