Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1020 ATGATCTCTTCAATATCTCTTCCTTCTTCTCTCTTCACCGCCGGAAACTTCTCCGGCACCTCCGTAACACCACCGCCGTGCCACGTAAGATCGAAGCCAATAATCACCACCGCAAGCGCAACAGCAACTGCCGAAGCTCGTTCTACATGGACAGAGCAACAAAGACCTTCGTATCTGAACATGAACACTTCTCACTCTTCTCCTGCATCGCTTTACGAGATCCTCGGTGTATCAGCAGGTGCTTCGAATCAAGAGATTAAATCGGCATACCGGCGACTTGCAAGAGTCTACCACCCTGATGTGGCGGCGATTGACCGGAAAAACTTGTCGGCGGATGATTTCATGAAGATTCACGCTGCTTATTCGACGTTGTCGGATCCTGAAAAACGTGATAACTATGATCGGAGTTTTTTCCGGCGACAACGGCCGTTGTCGTCGATGATGTCTTCCGGCTACTCGGGTCGGAGATGGGAAACTGATCAGTGTTGGTAG 492 0.502 MISSISLPSSLFTAGNFSGTSVTPPPCHVRSKPIITTASATATAEARSTWTEQQRPSYLNMNTSHSSPASLYEILGVSAGASNQEIKSAYRRLARVYHPDVAAIDRKNLSADDFMKIHAAYSTLSDPEKRDNYDRSFFRRQRPLSSMMSSGYSGRRWETDQCW* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1020 163 CDD DnaJ 72 126 IPR001623 -
Mal6g1020 163 SUPERFAMILY Chaperone J-domain 13 133 IPR036869 -
Mal6g1020 163 Pfam DnaJ domain 71 134 IPR001623 -
Mal6g1020 163 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 163 - -
Mal6g1020 163 Gene3D DnaJ domain 56 151 IPR036869 -
Mal6g1020 163 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
Mal6g1020 163 SMART dnaj_3 69 129 IPR001623 -
Mal6g1020 163 PRINTS DnaJ domain signature 90 105 IPR001623 -
Mal6g1020 163 PRINTS DnaJ domain signature 72 90 IPR001623 -
Mal6g1020 163 PRINTS DnaJ domain signature 109 129 IPR001623 -
Mal6g1020 163 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Mal6g1020 163 PANTHER - 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1020 Mal-Chr6 15255153 15265107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1020 62 134 C2H2 Transcription Factor Family AT1G74250 40.260 2.47e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1020 - - gmx:100816709 218.779