Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1006 ATGGCAAAAACCATAGACAAAATAAGTTCTGATTCTGAAACTTCTTTATGCTCATCAGGTTCAAGCTCACCAATGGTTAATAAGTATAGGTACATGTTTAATAGACTATTCAGGTTTACAAATTCATGGAAGAAAAGTAACTCACCAAGAGGTAGAAGAATTTTCCACAGAGATGTTGAAAAAGAAGAATTTCAATATGCTAGTAGTCATTGTCTTTCATCCTACTACAGTGTTTTTGTTGTTAGATTAGCAATCATGGTAATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTTACAAAGATTTATACGAAAAAATCATTGAGTAGTTTGGCATATGGTCTGCGTTATGAGCTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAACTCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAGTATGTTATCAGACGTTATAGCAACCCTGCATCTCAAGCAGAGCAAGTTGAGCAGCTATATGAAGCAATGAGAGCTGTAACATGGTCACTGTTTGCTAGTAGAAAAGCTCTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAACACATTTTACATCTACTCAGATCTTTCAAATTACTCAATGGTTGCAACAACCTCAAACATGGTCAAGTCCCTTTCAACTCATCAAGCTTGGGATGATAAAACACTTCATGGAAACTTTTCAGCAATTTGGTATAGAGAACCACTTGATCCTGTCACTGGTGAAAAAATGGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAACATAGCAGGACTTTCACAAGTTCCTGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCACCGTTGCTTTCAGCGGCGTTACCTGTTTGGGATTCTTCTAATAAAAGTATTATGGCTGTTGTTGGTGTAACAACTGCATTTTATAGTGTTGGACAGTTAATGAGAGAGTTAGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACAAGTGCACCTTTACTTACAAATTCAACTAAGCCACCACCAATGCTTAAGATGGCTGTGGATTGTGAAGATGATGTAATAAGACTTGGAGCTGAGTGGTTACAAAGAACTTATGGGAATCATTTTCCTAATTCAACTCATGAGGTTCATGTTGAGAATGCTAAGCTAGGGAATCAGCAATATTACATTGATTCATTCTACTTAAACCTGCAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGGCAGGTGGATGAGAGATCTTTCAAAACTTTGGTTATTTTGATATCTGCATCTTTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATTTAAGAGCTGAACTGATAAGTCAACTTGAAGCAAGAAGGAAAGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTACTCCGTCTTCTTAACAACATATTGGATCTGAGCAAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTTGACTTGGGACGTGAACTTGAAGGGCTTGTAGACATGTTTTCTGTTCAGTGCATTAATCATAATGTAGAAACTGTTTTAGACCTTTCTGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGTAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTCACTACATCTGGTCATGTTATTCTGCGAGGATGGTGCGAATATCCGAATTCTTGCAACGATAGTCCAAATTTTCATCTTGATCAAAAGAAATCAAGGAATTTACATAAGAGCAAAGAGAAGCCAAATGCAAATCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATCGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCGACTACTCGACTGCATGGAGGGACTGGTCTTGGTCTTTGCATTGTTAGGAATTTGGTTAATAAGATGGGTGGAGAAATCAAAGTTACCAAAAAGGAGGGTCAAGGAACATTGATGAGATTATGTTTGCTTCTCAGTGCACCAACGGATGTCACAGAACAACATTGTGCTGTAAATTTGACAGATAATGGCTTAGTGGTATTGCTTGCACTACAAGGCAACATGGGTAGAATAATAACATCAAAATGGTTAACTAAAAAAGGGGTGTGCACAATGGAAGCGTCGGAATGGAATGGACTAACACAAATTTTGAGGGAACTCTTTCATGCTAGAACTTCAATCCATAATAACAACAACTTTGATGCACACTATCCAATAAATCTTGAAGGATTCAAGTCCAAACTACTAAGCATAAAAGACATGAGAAATCCAATTTTTGTCATTGTTGTTGACATTGGGTTACTTGACTTAAGCACAGATATATGGAAAGAACAGCTTAACTTTCTTCACAAGTATTTTGGAAGAGCAAAATTTGTGTGGATGCTAAATCATGACACATCAAATACCATAAAGACGGAGCTTCGTCGGAAAGGACACTTATTAATGGTTAACAAACCTGTTTACAAAGCAAAAATGATTCATATTTTAGAAGCTGTTATAAAAGAGAGAAATCTTGAGTTACAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCATTTTGATGCTACTACTAGCTCTGATGATTCTGATATATCTGAAATTATTGAAAAACCAATTTTAAAGTTAACCAATGAAAATGAACATTTGGAAGAAAATAATCCATGGAAAGAAGAATCTTGTTCCTCCGAAGACAACAAAGCTAAATCATTGTCCACTAAAGAAACAAACTTTGCAACACAAGCTTATGATAGGGTGACAAGGTCAAGAAAAGAAGTGAATGATAAGAAATCTCTTGAGGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCGACGATAATGCTTGAAAAAATGGGAGCTGTTGTAGTTGCTGTAGGTGATGGACAACAAGCAGTGGAAGCTCTTAATTACATGGTAAGTGCTGAAGATAGTAGAAGAGAGTCTCTTCAGAAGGAAAGAAATACAAGATCACAAACTGAGATTTTGAGTTGTCATCAATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGAAAACACATACCAATTGTTGCTCTAACAGCCCATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTGGGAATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCTTATGGTCTCCACCATTCTCTCACTCACTAAACCAACATCTTGA 3624 0.3659 MAKTIDKISSDSETSLCSSGSSSPMVNKYRYMFNRLFRFTNSWKKSNSPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRRYSNPASQAEQVEQLYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVATTSNMVKSLSTHQAWDDKTLHGNFSAIWYREPLDPVTGEKMGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPMLKMAVDCEDDVIRLGAEWLQRTYGNHFPNSTHEVHVENAKLGNQQYYIDSFYLNLQRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFHLDQKKSRNLHKSKEKPNANHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGQGTLMRLCLLLSAPTDVTEQHCAVNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARTSIHNNNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTSNTIKTELRRKGHLLMVNKPVYKAKMIHILEAVIKERNLELQKKNMKEGDLHEFLEIDSTHFDATTSSDDSDISEIIEKPILKLTNENEHLEENNPWKEESCSSEDNKAKSLSTKETNFATQAYDRVTRSRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVEALNYMVSAEDSRRESLQKERNTRSQTEILSCHQYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTS* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1006 1207 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 623 773 IPR003594 -
Mal6g1006 1207 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 565 771 IPR036890 -
Mal6g1006 1207 Pfam His Kinase A (phospho-acceptor) domain 511 576 IPR003661 GO:0000155|GO:0007165
Mal6g1006 1207 Pfam Response regulator receiver domain 1114 1198 IPR001789 GO:0000160
Mal6g1006 1207 PRINTS Bacterial sensor protein C-terminal signature 718 728 IPR004358 GO:0016310|GO:0016772
Mal6g1006 1207 PRINTS Bacterial sensor protein C-terminal signature 759 772 IPR004358 GO:0016310|GO:0016772
Mal6g1006 1207 PRINTS Bacterial sensor protein C-terminal signature 735 753 IPR004358 GO:0016310|GO:0016772
Mal6g1006 1207 PRINTS Bacterial sensor protein C-terminal signature 700 714 IPR004358 GO:0016310|GO:0016772
Mal6g1006 1207 SMART REC_2 1057 1199 IPR001789 GO:0000160
Mal6g1006 1207 SMART HKATPase_4 623 775 IPR003594 -
Mal6g1006 1207 CDD HisKA 511 572 IPR003661 GO:0000155|GO:0007165
Mal6g1006 1207 CDD REC_hyHK_CKI1_RcsC-like 1059 1199 - -
Mal6g1006 1207 SUPERFAMILY CheY-like 1055 1203 IPR011006 -
Mal6g1006 1207 SMART HisKA_10 510 576 IPR003661 GO:0000155|GO:0007165
Mal6g1006 1207 PANTHER OSMOSENSOR HISTIDINE KINASE 25 993 - -
Mal6g1006 1207 PANTHER OSMOSENSOR HISTIDINE KINASE 1026 1204 - -
Mal6g1006 1207 Gene3D - 578 776 IPR036890 -
Mal6g1006 1207 ProSiteProfiles Response regulatory domain profile. 1058 1203 IPR001789 GO:0000160
Mal6g1006 1207 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 498 577 IPR036097 GO:0000155|GO:0007165
Mal6g1006 1207 Gene3D - 1035 1203 - -
Mal6g1006 1207 PANTHER TWO-COMPONENT HISTIDINE KINASE 25 993 - -
Mal6g1006 1207 PANTHER TWO-COMPONENT HISTIDINE KINASE 1026 1204 - -
Mal6g1006 1207 Gene3D - 498 577 - -
Mal6g1006 1207 MobiDBLite consensus disorder prediction 1 22 - -
Mal6g1006 1207 ProSiteProfiles Histidine kinase domain profile. 517 775 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1006 Mal-Chr6 15024628 15031417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1006 23 1207 Histidine Kinase Gene Family AT2G17820 65.257 0.0 1585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g1006 HATPase_c 5e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1006 - - gmx:100807543 1930.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1006 6 15024628 15031417 Mal6g1006 6 15024628 15031417 ECH
Mal6g1006 6 15024628 15031417 Mal5g3312 5 96579173 96584052 PCT