Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1005 ATGTCTTCCTTGAGTAAATTCCCTCAATCTTCACAACCATTTTTGAATGATCACACATCAACAAAAAATCCACCCAAAGCATTAAGGATACTTGACGTGTTCTTAAGTTTTAGAGGCGAAGATACTCGTGCTTCCTTCACTTCACATCTCCATGCTTCTCTTAAAAATGCCGGAATTAATGTTTTCATCGATAATTCTATTCAACGAGGAGATCACGTCTCAAAAGTACTACTACAAGCTATCGAAGATTCTCGAATTTCTGTTATTGTTTTTTCAAAAAACTACGCGGAATCCAAGTGGTGTTTGAAAGAAGTGGAGAAAATTATGGAGTGTCATAGAACCATAGGACAAGTTGTTTTGCCAGTATTCTACGGTGTAGATCCATCAGAAGTGCGTCATCAAACAGGTGAATTTGGTAATGCATTTCAAACTCTCTTGAAAAGAATTGCAAAGATGGAACACAATTGGCTTTTAGAAGAGAAGAAAGATGAATCGCCACTTAGTCAGCGTTTGGAACTACGGTGGAGAGCGGCTCTTCGTGAGGCCTTGCAGGATTTGAATGAAAGTGAGGCTATCAAAGATATTGTTGAAAGTATTACACGATTGCTTGACAAGACAGACTTGTTTATTGCTAATAATCCAGTAGGGGTTGAATCTCGAATGCGAAATATGATTCAATTGTTAGACATCCAACAGTCAAATGATGTTCTCCTAGTAGGGATGTGGGGTATGGGAGGTATTGGTAAAACTACCATTGCCAAAGCGATTTACAATAAAATTGGTTGTAGTTTTGAAGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAGAATGCTGGACAAGTGAATTTACAAGAACAACTTATCTTTGATATCTGCAAAGAAACGACAACCAAGATACAAAACATTGAATCGGGAAATATTATATTAAGGGATAGACTCCGCCATAAAAGAGTACTTCTCGTGCTTGATGATGTGAATACCCTGGATCAACTAAATGCTTTGTGTGGAAGTTGTAAATGGTTTGGTTCTGGGAGCAGAATAATCATCACAACCAGAGATTTGCATATACTTAGAGGGAATAGGGTTGATCAAGTATACAAAATGAAAGAAATGGATCAAAGTGAATCAATTGAGCTTTTTAGTTGGCATGCGTTCAAGCAATCGAGTCCTAGAGAAGATTTTGTTGGAATTTCCAGAAATGTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTCTAGAAGTTCTTGGATCCTATTTGTTTGAAAGGGGGGTAGCCGAGTGGGAATGTGTATTGGAAAAACTCAAGAAAATACCCAATGATCAAGTACATAAGAAGTTAAAAATAAGCTATGATGGTCTAAATGATGATATTGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGGTGTGAGCTTTATCCTGAAATTGGAATAAGTGTTCATGTTGAGAGAAGCCTTGTAACCGTGGATGAAAGGAATATGCTCGGAATGCATGATTTGTTGAGAGATATGGGAAGAGAAATCATTCGTGAGAAATCGCCAAAGGATCCTGAGGAGCGTAGCAGGTTGTGGTATAATAAGGATGTGCTTGATGTATTATCAGAACAAACAGGAACAAAAGTTGTTGAGGGTCTTGCTCTGAAGTTGCCAAGAGATAATGCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGGTGGTGTACAACTTGATGGCAATTTTGAATATCTTTCTAGAAATTTGAAATGGTTATCTTGGAATGCATTTCCTTTAACATGCATACCTACCGACTTTTATCAAGAAAATTTAGTTTCCATCGAGTTAGAAAACAGCAATGTCAAAGTTCTGTGGAAAGAGACCCAGAGGATGGAGAAGCTAAAAATTCTCAATCTTAGCCACTCTCATTATCTGACACAAACCCCGGACTTTTCAAAATTGCCTAATCTTGAAAAGCTAGTACTCACAGATTGTCCGAGGTTGTTAGAGGTTTCGCATACTATAGGACTTCTCAAAAAAGTTCTTTCGATAAATTTGGAAGATTGTATTAGCCTTCGTAGCCTTCCAAGAAGTATATACAAGTTGAAATCTCTAAAGTCTCTCATTCTTTCGGGGTGTTTAATGATTGACAAGTTGGAGGAAGACTTGGAACAGATGAAATCTTTAACCACTTTGCTTGCAAATAATACTGCAATAAAAAGAGTACCCTTTTCATTATTAATGATAGGACACCAAGGTCCAATAGGATTGATGACCCAGTCATTGGGCCCGACCCACACAAGCATGGTTTCTGGAAAGGAGCAGAAGCTGAGGGAAGTTTGGTGGCTTGAGCCACAATCTTAG 2415 0.3785 MSSLSKFPQSSQPFLNDHTSTKNPPKALRILDVFLSFRGEDTRASFTSHLHASLKNAGINVFIDNSIQRGDHVSKVLLQAIEDSRISVIVFSKNYAESKWCLKEVEKIMECHRTIGQVVLPVFYGVDPSEVRHQTGEFGNAFQTLLKRIAKMEHNWLLEEKKDESPLSQRLELRWRAALREALQDLNESEAIKDIVESITRLLDKTDLFIANNPVGVESRMRNMIQLLDIQQSNDVLLVGMWGMGGIGKTTIAKAIYNKIGCSFEGRSFLANIREVWEQNAGQVNLQEQLIFDICKETTTKIQNIESGNIILRDRLRHKRVLLVLDDVNTLDQLNALCGSCKWFGSGSRIIITTRDLHILRGNRVDQVYKMKEMDQSESIELFSWHAFKQSSPREDFVGISRNVVEYSGGLPLALEVLGSYLFERGVAEWECVLEKLKKIPNDQVHKKLKISYDGLNDDIEKEIFLDIACFFIGMDRNDVIHILNGCELYPEIGISVHVERSLVTVDERNMLGMHDLLRDMGREIIREKSPKDPEERSRLWYNKDVLDVLSEQTGTKVVEGLALKLPRDNAKCFSTKAFKKMKRLRLLQLGGVQLDGNFEYLSRNLKWLSWNAFPLTCIPTDFYQENLVSIELENSNVKVLWKETQRMEKLKILNLSHSHYLTQTPDFSKLPNLEKLVLTDCPRLLEVSHTIGLLKKVLSINLEDCISLRSLPRSIYKLKSLKSLILSGCLMIDKLEEDLEQMKSLTTLLANNTAIKRVPFSLLMIGHQGPIGLMTQSLGPTHTSMVSGKEQKLREVWWLEPQS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1005 804 SUPERFAMILY "Winged helix" DNA-binding domain 444 550 IPR036390 -
Mal6g1005 804 ProSiteProfiles TIR domain profile. 29 183 IPR000157 GO:0007165
Mal6g1005 804 SMART till_3 30 185 IPR000157 GO:0007165
Mal6g1005 804 Coils Coil 733 753 - -
Mal6g1005 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 765 IPR044974 GO:0006952
Mal6g1005 804 Gene3D Ribonuclease Inhibitor 562 768 IPR032675 -
Mal6g1005 804 Gene3D - 201 368 IPR027417 -
Mal6g1005 804 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 145 IPR035897 -
Mal6g1005 804 Gene3D - 373 457 IPR042197 -
Mal6g1005 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 468 IPR027417 -
Mal6g1005 804 Pfam TIR domain 32 199 IPR000157 GO:0007165
Mal6g1005 804 SUPERFAMILY L domain-like 564 761 - -
Mal6g1005 804 MobiDBLite consensus disorder prediction 1 21 - -
Mal6g1005 804 PRINTS Disease resistance protein signature 408 422 - -
Mal6g1005 804 PRINTS Disease resistance protein signature 646 662 - -
Mal6g1005 804 PRINTS Disease resistance protein signature 315 329 - -
Mal6g1005 804 PRINTS Disease resistance protein signature 238 253 - -
Mal6g1005 804 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 37 765 - -
Mal6g1005 804 Pfam NB-ARC domain 218 453 IPR002182 GO:0043531
Mal6g1005 804 Gene3D - 30 200 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1005 Mal-Chr6 15016355 15020205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1005 32 763 WRKY Transcription Factor Family AT4G12020 31.704 3.95e-87 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1005 - - cam:101494533 1118.61