Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0981 ATGACACTCAAAGCCGTTGTATCACTTGTCTTCAATTTAATTGGCCTAGAAGAGTCACAAACAAACAAGGATGCAACATTACCTTACATTGTTGCCACCTCAATTCTCCCAGAGAAGATTAATCAACAATCATCAGAATCTTCAACAACAACATCCAATCTTATGGAGAAAAATAATGATGTTGGTTTGTGTTGTGTCTGCTTGTCAATGTTAAACAACAAAGATGAAATTCGTGTGCTTCCTTGTTCGCACGAATTTCACAAGGTTTGTGTAAATAGTTGGCTAAAGGGTCATCATAAAACATGTCCATTGTGTCGTTTTTCAATGGGAGCTGAAGAAAAGTCTCATCGTGCTGAAATGTTCAGTGAAGACATGCTAATATGGTTTTCTTCTTTCCATATAGCTGGTATGTAA 414 0.3671 MTLKAVVSLVFNLIGLEESQTNKDATLPYIVATSILPEKINQQSSESSTTTSNLMEKNNDVGLCCVCLSMLNNKDEIRVLPCSHEFHKVCVNSWLKGHHKTCPLCRFSMGAEEKSHRAEMFSEDMLIWFSSFHIAGM* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0981 137 SUPERFAMILY RING/U-box 49 110 - -
Mal6g0981 137 Pfam Ring finger domain 64 106 IPR001841 -
Mal6g0981 137 PANTHER GB|AAF27103.1 4 121 - -
Mal6g0981 137 PANTHER TARGET OF ERK KINASE MPK-1 4 121 - -
Mal6g0981 137 CDD RING-H2_PA-TM-RING 64 106 - -
Mal6g0981 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 111 IPR013083 -
Mal6g0981 137 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Mal6g0981 137 SMART ring_2 64 105 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0981 Mal-Chr6 14692860 14693273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0981 57 106 C3H Transcription Factor Family AT5G45290 50.980 7.56e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0981 - - mtr:MTR_5g022770 222.246