Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0980 ATGAGCATCAGTACTCTACAACTTCACTCTCCAGATTTGAGACCTTTGACACCTCTCTCACTCACTCACTCTCTCTCTCTCTCAATCAATTCAAATCCCACCTTTTATGTTCTAACATATTGCCCTATCCCACCAAATACAACTCGTCATCATCAACATCTAGTGAACAAAAACGGTGCGTGCTTACCTCAAATCAAACTCAATAGTGTAGTGTGTCCTTTTTCCTTGTCCTTGTCTCTCAAAAAAGAAATTAAATATCACCATCACAAACTTCATTTTCCTCTTTGTAGAAGGAAATTAACCAACCCAACCATGGAAGAAGTATGGAAAGACATAAACCTTTCTTCATTGAATGACCAAAACACACACCCCATGATGATGACTACTCGTAATTCCACTTTTGGTGGTGGTGTTATTCTTCAAGACTTTCTTACTAGACCCCTTAACTTAGACCCACCAAAAAGCATGGATTATTCTTCTAATAATTCATCTTCTTCTGTTGCTTCAGATCAAAATAATAATGCTTCTTTTTATTGCCCTATCTCAACGACCCCACCACCTCTTATCACTGCTCTTAGTTTGAATTCTCATCCTGAACATTTTCATTTCGACCCTCTTATCACCCACAACAAGCAAAGTAATTCACAGTTACTACTTCAGCAGCAGCAACAACAACAACAACAACACAACATTGCTGCCTCAAAGGTTTCTGGTTTCTCTAATCCTTTACCGTACAACCAGAACGCGGGTGCTGCATCTAATTCTTTCACTTGTTTTGGAAAGAGGTTTGGTGAACCACCTGATGATAGTCCTGTGGAAAGGAGAAATAAGAGGATGATCAAGAATAGAGAATCTGCTGCACGTTCACGAGCTAGAAAACAGGCTTATACAAATGAATTGGAGCAGAAAGTTCAACTATTGCAGGAAGAGAATGCAAGACTTAGAAGACAGCAACAAGAGTTATGGGAAGCAGAAAGTGGTGGTCAACAAAAAAAGAAGAATAGCTTATCTCGAACATCAACATTTTGA 1029 0.3897 MSISTLQLHSPDLRPLTPLSLTHSLSLSINSNPTFYVLTYCPIPPNTTRHHQHLVNKNGACLPQIKLNSVVCPFSLSLSLKKEIKYHHHKLHFPLCRRKLTNPTMEEVWKDINLSSLNDQNTHPMMMTTRNSTFGGGVILQDFLTRPLNLDPPKSMDYSSNNSSSSVASDQNNNASFYCPISTTPPPLITALSLNSHPEHFHFDPLITHNKQSNSQLLLQQQQQQQQQHNIAASKVSGFSNPLPYNQNAGAASNSFTCFGKRFGEPPDDSPVERRNKRMIKNRESAARSRARKQAYTNELEQKVQLLQEENARLRRQQQELWEAESGGQQKKKNSLSRTSTF* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0980 342 Coils Coil 290 327 - -
Mal6g0980 342 MobiDBLite consensus disorder prediction 322 342 - -
Mal6g0980 342 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 104 341 IPR043452 GO:0003700|GO:0045893
Mal6g0980 342 SMART brlzneu 270 335 IPR004827 GO:0003700|GO:0006355
Mal6g0980 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 272 321 IPR004827 GO:0003700|GO:0006355
Mal6g0980 342 MobiDBLite consensus disorder prediction 318 342 - -
Mal6g0980 342 CDD bZIP_plant_BZIP46 274 321 - -
Mal6g0980 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 277 292 IPR004827 GO:0003700|GO:0006355
Mal6g0980 342 SUPERFAMILY Leucine zipper domain 274 322 IPR046347 GO:0003700|GO:0006355
Mal6g0980 342 Gene3D - 272 325 - -
Mal6g0980 342 PANTHER PROTEIN FD-LIKE 104 341 - -
Mal6g0980 342 Pfam bZIP transcription factor 274 323 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0980 Mal-Chr6 14683295 14685096 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0980 104 294 bZIP Transcription Factor Family AT4G35900 36.585 1.67e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal6g0980 bZIP_1 8.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0980 K14432 - mtr:MTR_7g015990 193.741