Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0962 ATGGCGGACACCGGCGGTGACGGTAACGGTTTTACATATCTTCACGGCGATCTTGACTTAACAATAATCTCCGCTCGCCGGTTACCTAACCTGGATTTGTTCTCCGAGCATTTCTGCCGCTGTATAACGGCTTGCGATACTATTAAATTCCACTCACCACCTTCCGACTCCACCCCCGCCGACGACGGCGGCGGAACCACCACGACTCGCCGTGAACACCATCACCGGAGAAAAATTATCCGAAGTGATCCCTACGTCACTGTTTCTGTACCGCAAGCAACCGTTGCACGGACACGTGTGTTGAAGAATTCACTCAATCCTGAGTGGAAAGAACGGTTTCACATTCCGTTAGCGCATCCGGTTATTGATTTGGAGTTTCGTGTGAAAGATGATGATGTGTTTGGTGCTGAAGTTATGGGGATGGTTAAGATTCCGGCGAAGAGAATTGCCACCGGTGAGTTGATTTCCGGTTGGTTTCCTATTGTTGCGAACTCAGGTAAGCCGCCGAAGCCTGATACAGCACTGAATATAGAAATGAAATTTACTCCGGTGGATGAGAATCCGTTATACCGGCGTGGCATTGCGGCTGATCCGGAACATAGAGGTGTGAGGCATACGTATTTTCAGGTGAGGAAGGGGAGTTCTGTGAGGCTTTACCAAGATGCACATTGTCCGGAAGGAACCCTACCGGAGATTCAGCTTGATGGTGGGAAGGTTTATAGAGGGGAGAATTGTTGGGAAGATATATGTTATGCTATAACAGAAGCTCATCATATGGTTTATCTGGCGGGTTGGTCGATTTACCATAAGGTGAAGCTTGTTAGGGAACCTTCTAGGCCTTTGCCGAAAGGTGGTGATTTAACACTTGGTGATTTGCTTAAGTATAAGAGTGAAGAAGGTGTGAGGGTTTTATTGCTTGTTTGGGATGATAAAACTTCCCATGATAAGCTCTTTTTCAAGACGACCGGAGTGATGGAGACTCATGATGAGGAAACTAGGAAGTTTTTCAAACATTCTTCCGTTATGTGTGTTTTGGCGCCTCGTTATGCTAGTAGTAAGATGAGCTTCATTAAGCAACAGGTTGTTGGAACCGTCTTCACACACCACCAAAAATGTGTTATTGTGGACGCACAAGCTGCTGGTAATAACAGAAGGATAGCTACTTTTATAGGAGGTCTTGATATATGTGATGGTCGCTATGACACACCTGAGCATCGCCTTTTTCGTGATCTTGATACTGTATTTGCCGGTGATTTCCACAATCCTACATTTCCTTCTGGAACAAGGGCTCCTAGACAACCTTGGCATGATTTGCACTGCAGAATAGACGGACCCGCTGCATATGACGTTCTTATTAATTTTGAACAACGATGGAGAAAAGCAACTAAGTGGAGAGAGTTTGCATTTCTTTTCAAAAAAGCTTCTCAGTGGAATGATGACGCTTTAATAAGAGTAGACCGTATCTCATGGATATTAAGTCCTTCTCTTCCTACTCCTCACACCCCTAAGGAACCTAAGGAAGGTTATACAATTGTTCCAGGGGATGATCCTTTAATATGGGTTGCCAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCTTGAAAGGATTTCCCAAACGTGCTGATCAAGCTCTATCCCAGAATCTTATATGTGCTAAAGATTTGGTTATAGACAAAAGCATTCAAACAGCATATATCCAAGCTATCAGATCTGCTCAACATTTCATTTATATTGAAAACCAATACTTTATTGGATCTTCATATGCATGGCCATCTTACAATAATGCAGGGGCTGATAATCTTATCCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAAAGCTAAGGAGAGATTTGCTATTTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAAATCTGGAGCTGTGCAAGAAATCCTTTTCTGGCAGGCTCAGACAATGCAAATGATGTATAATGTTGTTGCTAAAGAATTGAAATCACTGCAACTTAGTGATGTGCACCCACAAGACTACCTCAATTTCTATTGCCTTGGTAATCGGGAACACCCCAATGAACAAAGCTCAGGCTCGAATGGTGCACCGGTCTCTGGAGCATTTAAAAATGGTCGAAATATGATTTATGTGCATGCCAAGGGAATGATCGTGGATGATGAATATGTTATAGTGGGATCTGCTAACATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTTCATATCAACCCCATTACACGTGGTATGGGAGGAAAAGGCATCCACATGGTCAGATTTATGGTTACAGAATGTCACTTTGGGCAGAGCATCTTGGCATGTTAGATGAAACATTTAAAGAACCAGAGAGATTGGAGTGTGTGCGTAAAGTGAATGAAATTGCAGACAGTAATTGGATAAAATACTCTTCTGAAGAAATGTCACTGCTGCAGGGACATCTTCTTAAGTATCCTATTCAAATAGATTCTGATGGGCAGATCAGCTCATTACCTGAGTGTGATAGTTTCCCAGATGCCGGTGGTAAGATACTGGGGGCTCATTCTACAACAATTCCAGATATCCTAACAACTTAA 2616 0.4304 MADTGGDGNGFTYLHGDLDLTIISARRLPNLDLFSEHFCRCITACDTIKFHSPPSDSTPADDGGGTTTTRREHHHRRKIIRSDPYVTVSVPQATVARTRVLKNSLNPEWKERFHIPLAHPVIDLEFRVKDDDVFGAEVMGMVKIPAKRIATGELISGWFPIVANSGKPPKPDTALNIEMKFTPVDENPLYRRGIAADPEHRGVRHTYFQVRKGSSVRLYQDAHCPEGTLPEIQLDGGKVYRGENCWEDICYAITEAHHMVYLAGWSIYHKVKLVREPSRPLPKGGDLTLGDLLKYKSEEGVRVLLLVWDDKTSHDKLFFKTTGVMETHDEETRKFFKHSSVMCVLAPRYASSKMSFIKQQVVGTVFTHHQKCVIVDAQAAGNNRRIATFIGGLDICDGRYDTPEHRLFRDLDTVFAGDFHNPTFPSGTRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATKWREFAFLFKKASQWNDDALIRVDRISWILSPSLPTPHTPKEPKEGYTIVPGDDPLIWVASEDDPENWHVQIFRSIDSGSLKGFPKRADQALSQNLICAKDLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYNNAGADNLIPMELALKIASKIKAKERFAIYIVLPMWPEGDPKSGAVQEILFWQAQTMQMMYNVVAKELKSLQLSDVHPQDYLNFYCLGNREHPNEQSSGSNGAPVSGAFKNGRNMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHYTWYGRKRHPHGQIYGYRMSLWAEHLGMLDETFKEPERLECVRKVNEIADSNWIKYSSEEMSLLQGHLLKYPIQIDSDGQISSLPECDSFPDAGGKILGAHSTTIPDILTT* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0962 871 Gene3D Endonuclease Chain A 537 761 - -
Mal6g0962 871 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 716 743 IPR001736 GO:0003824
Mal6g0962 871 SMART pld_4 716 743 IPR001736 GO:0003824
Mal6g0962 871 SMART pld_4 364 399 IPR001736 GO:0003824
Mal6g0962 871 SUPERFAMILY Phospholipase D/nuclease 241 471 - -
Mal6g0962 871 MobiDBLite consensus disorder prediction 52 76 - -
Mal6g0962 871 PANTHER PHOSPHOLIPASE D DELTA 11 871 - -
Mal6g0962 871 SUPERFAMILY Phospholipase D/nuclease 567 801 - -
Mal6g0962 871 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 184 IPR035892 -
Mal6g0962 871 Gene3D Endonuclease Chain A 233 481 - -
Mal6g0962 871 PANTHER PHOSPHOLIPASE D 11 871 IPR015679 -
Mal6g0962 871 Pfam Phospholipase D C terminal 790 860 IPR024632 -
Mal6g0962 871 Gene3D C2 domain 14 189 IPR035892 -
Mal6g0962 871 CDD C2_plant_PLD 13 182 - -
Mal6g0962 871 Pfam C2 domain 16 161 IPR000008 -
Mal6g0962 871 Pfam Phospholipase D Active site motif 716 743 IPR001736 GO:0003824
Mal6g0962 871 Pfam Phospholipase D Active site motif 364 399 IPR001736 GO:0003824
Mal6g0962 871 PIRSF PLD_plant 6 871 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mal6g0962 871 SMART C2_3c 17 158 IPR000008 -
Mal6g0962 871 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 364 399 IPR001736 GO:0003824
Mal6g0962 871 ProSiteProfiles C2 domain profile. 44 159 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0962 Mal-Chr6 14414847 14422268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0962 14 707 Phospholipase D Gene Family (Wang group) AT4G35790 70.029 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0962 K01115 - gmx:100801787 1460.28