Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0954 ATGGTGATCGAGAACGACATTGAGAGTTGCGGAAGCAGAGCGGTGCAATCACACGCGAATCCTCGCCATCACCGTCAAAAACTTGAAGTATACAATGAAGTTCTTCGTCGAATTCAGGATTCCGATTGCGAAGACGCTCATGTTCCTGGTTTCGATGATCAACTTTGGCTTCACTTCAATCGTCTTCCCGCTAGGTATGCATTGGATGTGAATGTGGAGAGAGCAGAAGATGTTCTTGCTCATAAGAGATTGCTCGAGTTGGCGGAGAATCCGGCCAATCGCCCTGCATTTCAAGTTCGTTTAGTACAGGTATTACCTTTTGGTAGTGCAAATCATAATGATTCTTCCGTGCATTCAGATCGTTCTGAAAAAGATGATGCACAGAGTTCTCTTAACTATTCTTTAAAGCAGGGTATTCATCCACCACCTACGTTTGGTTCCTCCTCTAACCTTGAAGCTCTTGCACTTCAAACAAATAAAAATAACATTGAAGATGGAGACAATACTATGGGTGTAACGCCGAATTTTAACCGGCCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCAATACTTGGTGAGATTGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCTCTGATGGGTTTTCCCTGGATGTCTTTGTCGTTGAGGGATGGCCTAATGAGGAAACTGAAGAGCTTAAAGGTGTGTTGGAAAAGGAAGTTTTGAAGGTTAAGGACCAATATCTTTCAAATCAGGGCATACCTTATTCCTTAAATGATCAATACCAGACAAGGATGGAATCCTCCCCTGATTGCATACAAATACCATTTGATGGAGCTGATGTCTGGGAAATTGATCCCAGCCAGCTAAAATATGAAAACAAAGTTGGCTCTGGATCATTTGGTGACTTGTTCAGAGGCAGTTATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAACGCATAAGTACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGTGCTTGTACTCGGCCACCAAATCTTTGTATTGTTACTGAGTTTATGTCGAGAGGAAGCTTATATGACTTTCTGCACAGACAAAAGGGTGTGTTTAAGCTTCCATCTTTACTAAAAGTAGCCATTGATGTTTCCAAGGGAATGAACTATCTGCACCAAAATAATATTATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGACGAAAATGAATTGGTCAAGGTTGCTGATTTTGGGGTCGCCAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATATCTCTTTGGGAGCTTTTAACTGGAGAGCTGCCTTACTCTTACTTGACTCCATTACAAGCAGCAGTTGGCGTCGTGCAGAAGGGTCTACGACCTACAATTCCCAAAAATACACATCCAAGAATTTCTGAACTACTACAACGGTGCTGGCAACAAGATCCAAAGGAGAGACCAGCTTTTTCTGAAATAATTGAAATTCTCCAACACATAGCAAAAGAGGTTAATGATGAAAAATCAGATCGACACAAAGATAAATCACACGGTTTCCTCTCATCACTTAGGCGCGGCCATCACTGA 1728 0.4201 MVIENDIESCGSRAVQSHANPRHHRQKLEVYNEVLRRIQDSDCEDAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLELAENPANRPAFQVRLVQVLPFGSANHNDSSVHSDRSEKDDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQTNKNNIEDGDNTMGVTPNFNRPMHEITFSTIDKPKLLSQLTSILGEIGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEKEVLKVKDQYLSNQGIPYSLNDQYQTRMESSPDCIQIPFDGADVWEIDPSQLKYENKVGSGSFGDLFRGSYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHRQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENELVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGISLWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRISELLQRCWQQDPKERPAFSEIIEILQHIAKEVNDEKSDRHKDKSHGFLSSLRRGHH* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0954 575 Gene3D Transferase(Phosphotransferase) domain 1 374 570 - -
Mal6g0954 575 MobiDBLite consensus disorder prediction 552 568 - -
Mal6g0954 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Mal6g0954 575 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Mal6g0954 575 SMART serkin_6 295 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0954 575 SUPERFAMILY Protein kinase-like (PK-like) 273 544 IPR011009 -
Mal6g0954 575 SUPERFAMILY ACT-like 180 244 IPR045865 -
Mal6g0954 575 ProSiteProfiles ACT domain profile. 182 256 IPR002912 -
Mal6g0954 575 MobiDBLite consensus disorder prediction 552 575 - -
Mal6g0954 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 562 - -
Mal6g0954 575 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Mal6g0954 575 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Mal6g0954 575 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Mal6g0954 575 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Mal6g0954 575 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Mal6g0954 575 ProSiteProfiles Protein kinase domain profile. 295 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0954 575 CDD STKc_MAP3K-like 301 544 - -
Mal6g0954 575 CDD ACT_TyrKc 180 247 - -
Mal6g0954 575 Coils Coil 232 252 - -
Mal6g0954 575 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 15 562 - -
Mal6g0954 575 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Mal6g0954 575 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0954 Mal-Chr6 14332498 14340421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0954 2 574 MAP Kinase Kinase Kinase AT4G35780 69.031 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mal6g0954 PK_Tyr_Ser-Thr 4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0954 - - gmx:100816767 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3451 5 99530205 99531176 Mal6g0954 6 14332498 14340421 PCT