Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0916 ATGGGTCTCTGCTTCGCCTCACTCTCTCGCCAACCACCACCCTCTTCCCTCAATATTCCTAACACTTCAGGGTTAGGGAGTAATAATAATAATAAGAGTAAAGTTTGGGAAATGGGAAGTGGTGAAAGTGATAGTAAAGGAGAAGGAAGCATAGAGATAAGTGGGAAGTTTCTAGAAATGCCAAATTTGAAGGTGTTTAGTTATGGAGATTTGAAAACTGCCACAAAGAGTTTCAAGTCAGATGCATTACTTGGTGAAGGTGGTTTTGGTAAAGTGTATAAAGGTTGGTTAAATGCTGTGACACTCACCCCTGCCAAAGCTGGTTCTGGAATGATGGTGGCTATCAAGAAATTGAAACATGATAGTATTCAAGGTGTTCAAGAATGGCAGTCAGAAATCAACTTTTTAGGAAGGATTTCTCACCCCAACTTGGTGAAGCTACTAGGTTACTGCAGGGACAATGATGAATTTCTTCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTGGAGAATCATCTCTTTAGAAGAAATACTAACATAGAACCACTTTCTTGGAAAACCCGACTCAAAATAGCTATTGATGCAGCTCGTGGTTTGGCTTTTTTGCACTCCTCAGAGAAGCAAGTCATATATAGAGATTTCAAGGCTTCTAATATACTTCTTGATGGGAATTACAATGCAAAAATTTCAGATTTTGGGTTGGCTAAATTTGGACCAGCTGGAGGAGATTCACATGTGACTACTAGGATCATGGGCACATATGGTTATGCTGCCCCAGAATACATAGCAACAGGTCATTTGTATGTGAAGAGTGATGTTTATGGATTTGGTGTAGTGCTGCTTGAAATGTTAACAGGGTTGCAAGCATTTGATGCAAAGAGGCTTGAAGGACAGCAAAATCTAATTGACTGGATTAAGCCTTCTCTATCTGATAAAAGAAAGTTGAAAAGTAACATTGTGGATTACAGGTTAGAGGGCCAATATCCACCAAAGGCAGCATATGAAACAGCAAAACTTATTCTTAAATGCCTTCTTCCTGACCCTAAAAAACGTCCTTCTATGAAAGATGTTTTGGAGACATTGGAAGGTATAAAAGCTATCAAAGATAAAAGGAAGATATCCAAGAATCGTTGTACTAAGTCTGCAGCTATGGATAATTTACAAAAAGCCAATTTGTCCATTTAA 1185 0.3899 MGLCFASLSRQPPPSSLNIPNTSGLGSNNNNKSKVWEMGSGESDSKGEGSIEISGKFLEMPNLKVFSYGDLKTATKSFKSDALLGEGGFGKVYKGWLNAVTLTPAKAGSGMMVAIKKLKHDSIQGVQEWQSEINFLGRISHPNLVKLLGYCRDNDEFLLVYEFMPRGSLENHLFRRNTNIEPLSWKTRLKIAIDAARGLAFLHSSEKQVIYRDFKASNILLDGNYNAKISDFGLAKFGPAGGDSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLQAFDAKRLEGQQNLIDWIKPSLSDKRKLKSNIVDYRLEGQYPPKAAYETAKLILKCLLPDPKKRPSMKDVLETLEGIKAIKDKRKISKNRCTKSAAMDNLQKANLSI* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0916 394 MobiDBLite consensus disorder prediction 6 48 - -
Mal6g0916 394 SUPERFAMILY Protein kinase-like (PK-like) 55 361 IPR011009 -
Mal6g0916 394 Pfam Protein tyrosine and serine/threonine kinase 81 361 IPR001245 GO:0004672|GO:0006468
Mal6g0916 394 Gene3D Phosphorylase Kinase; domain 1 52 163 - -
Mal6g0916 394 Gene3D Transferase(Phosphotransferase) domain 1 164 389 - -
Mal6g0916 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Mal6g0916 394 PANTHER OS01G0588500 PROTEIN-RELATED 31 376 - -
Mal6g0916 394 ProSitePatterns Protein kinases ATP-binding region signature. 84 117 IPR017441 GO:0005524
Mal6g0916 394 MobiDBLite consensus disorder prediction 9 38 - -
Mal6g0916 394 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 31 376 - -
Mal6g0916 394 CDD STKc_IRAK 84 364 - -
Mal6g0916 394 ProSiteProfiles Protein kinase domain profile. 78 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0916 Mal-Chr6 13795916 13798310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0916 64 381 Receptor kinase-like Gene Family AT4G02010 48.598 2.29e-97 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal6g0916 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0916 - - gmx:100794193 515.768