Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0900 ATGGATAACTTGCAAGAAATTTATACTCATTCAACGGTTCCTTCCTCCTACAATCTATCCTATATGTTCCCGACCTCTTATTACAAGCTTGCATCCAGCAAGCAACGTCCAAAATGGACCGTGGAAGAGGATAGCATTCTTGTGGAATCGATAGATCGTTTTACGCAATGGTCCCATATTGCTACCCTTCTAAATGGCAAGATTGAAGAACAATGCAGGGAGAGATGGTATTACTATAAAGTATTCATTGGGAACATACTTTCCAGAAATAGGTTATCAAGGTTGCTTAAAGCATGGATAGTTGCACATGTTTTGCTCCCAAACTTGTAG 330 0.397 MDNLQEIYTHSTVPSSYNLSYMFPTSYYKLASSKQRPKWTVEEDSILVESIDRFTQWSHIATLLNGKIEEQCRERWYYYKVFIGNILSRNRLSRLLKAWIVAHVLLPNL* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0900 109 Gene3D - 30 80 - -
Mal6g0900 109 Pfam Myb-like DNA-binding domain 36 80 IPR001005 -
Mal6g0900 109 SMART sant 35 82 IPR001005 -
Mal6g0900 109 ProSiteProfiles Myb-like domain profile. 31 80 IPR001005 -
Mal6g0900 109 SUPERFAMILY Homeodomain-like 34 79 IPR009057 -
Mal6g0900 109 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 84 IPR017930 -
Mal6g0900 109 CDD SANT 38 80 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0900 Mal-Chr6 13474612 13475101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0900 38 79 MYB Transcription Factor Family AT4G18770 45.455 9.87e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g0900 Myb_DNA-binding 3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0900 K09422 - lang:109346178 60.8474