Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0894 ATGTCTTGTTCTTCTTCATCGGGATCGGAGGAAGATGATGAGGGCTTTGAATCCTATCGGAAAGGTGGCTACCATGCCGTTAGAGTCGCCGATCATTTCGCCGGTGGGAGGTATATTGCTCAGAGGAAACTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCTTATGATACTACAACCTCTTCATATGTGGCTCTCAAAATCCAGAAAAGCGCGGCCGAGTTTGTTCAGGCTGCCCTTCACGAGATCAACGTTCTTTCATCCATTGCTGATGGGGACCCATCGAATTCAAAGTGTGTTATCCAATTGATTGATCATTTTAAGCACACAGGTCCAAATGGGCAGCACCATTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGTTTGATCAGATATAACCATTATAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGTGTTTTGATTGGTTTGGATTACTTGCATAGTGAACTTGGTATAATCCACAGTGACTTAAAGCCTGAAAACATTCTTCTATTTTCAACTATTGATCCTTCCAAAGACCCTTTTAGATCTGGACTCTCCCCAATTTTAGAACGGCCCGAGGGAAACATAAACGGAGGACTTACAAGTCTTATTGAGAAAAGGTTGAAGAGAAGAGCAAAGAGTGCAGTTGCTAAAATATCGGGAAGAACAGCTTCAATTGAAGGAAGAGGAGAAGCTGCAAAGTCTGGTAGAAATATTGATGGGATTGATGTGAGAAGCAAGATTGTCGATTTTGGAAATGCGTGTTGGGCTGATAACAAGTTTGCAGAAGAAATACAGACAAGGCAGTATAGAGCCCCTGAAGTTATACTGAAGTCCGGTTATTCCTTCTCTGTAGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTTGCCACTGGAGATATGTTATTTACACCCAAAGGTGGTGGACAAGGTTATAGTGAGGATGAGGATCATCTTGCCTTGATGATGGAACTCCTCGGAAAGATGCCCCGGAAGATTGCTACTGCTGGAGCTCAATCCAAGAATTACTTTGACCGGCATGGTGATCTAAAAAGGATCCGAAGGCTAAAATTTTGGCCACTTGACAAATTGCTGATTGATAGATATAAATTTTCAGCGAATGATGCTCGTGAGTTTTCAGAATTTCTTTTGCCACTTTTTGACTTCACGCCAGAAAAACGACCAACTGCACGACAGTACCTCCAACACCCCTGGCTGAACTGCAAGGAATCAACGCCAAATGAAATGAGAAATGAATCTACTGTGGAAAAGGTTAATGTTGGTATGAGCAACCTTCAAATCAAGGTAGGAAAGTGA 1341 0.4243 MSCSSSSGSEEDDEGFESYRKGGYHAVRVADHFAGGRYIAQRKLGWGQFSTVWLAYDTTTSSYVALKIQKSAAEFVQAALHEINVLSSIADGDPSNSKCVIQLIDHFKHTGPNGQHHCMVLEFLGDSLLRLIRYNHYKGLPLNKVREICKCVLIGLDYLHSELGIIHSDLKPENILLFSTIDPSKDPFRSGLSPILERPEGNINGGLTSLIEKRLKRRAKSAVAKISGRTASIEGRGEAAKSGRNIDGIDVRSKIVDFGNACWADNKFAEEIQTRQYRAPEVILKSGYSFSVDMWSFACIAFELATGDMLFTPKGGGQGYSEDEDHLALMMELLGKMPRKIATAGAQSKNYFDRHGDLKRIRRLKFWPLDKLLIDRYKFSANDAREFSEFLLPLFDFTPEKRPTARQYLQHPWLNCKESTPNEMRNESTVEKVNVGMSNLQIKVGK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0894 446 SUPERFAMILY Protein kinase-like (PK-like) 32 416 IPR011009 -
Mal6g0894 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Mal6g0894 446 CDD STKc_SRPK 27 414 - -
Mal6g0894 446 Pfam Protein kinase domain 253 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0894 446 Pfam Protein kinase domain 39 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0894 446 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 446 - -
Mal6g0894 446 ProSiteProfiles Protein kinase domain profile. 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0894 446 SMART serkin_6 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0894 446 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Mal6g0894 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 446 - -
Mal6g0894 446 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Mal6g0894 446 Gene3D Transferase(Phosphotransferase) domain 1 92 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0894 Mal-Chr6 13404082 13407561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0894 4 415 EF-hand Containing Proteins AT5G22840 49.784 1.33e-162 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mal6g0894 Pkinase 3.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0894 K08832 - gmx:100784192 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0894 6 13404082 13407561 Mal5g3228 5 94603579 94608209 PCT