Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0890 ATGGTTAAAGTTTGGTTGTTGGCTCTAATGATTCTCCTCTACAATGGCTTCCCTTCAACTGTGGCTGACATTCATAATTCAACAAGGCCTGATGTTGTAAATATTGGGGCTCTCTTCTCTTTCAATACTAGTGTTGGTAGGATTATAAAAATCGCTATAGAAGCCGCGGTCGAAGATGTAAATTCGGATCCAAATATTCTCGGCGAGACCAAGTTGAAGCTCTCTCTTCAAGAAGATTCTAAATATAGAGGTTTTCTAAGCATTGCTGAGGTTTTGCAGGTCATGGCTAGACACAATGTGGCAATAATTGGCCCTCATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTTCAAGTTCCTCTGCTCTCATTTTCAGCTTTAGATCCTACCCTTTCTTCACTTCAATTCCCATTCTTTATCCGAACTTGTCACAGTGATCTTTATCAAATGGCTGCAATAGCAGACCTTGTTGACTACTATGGATGGAAAGAAGTCATTGCTGTATACATTGATGATGACAATGGAAGGAACGGAATCGGTGCATTAGGCGATAAGCTTTCCGAGAAGCGTTGTAGGATCTCATATAAAGCGCCTGTGAGCCCAGAAGCAACTACAGAGGAGATAACAAATGTGCTAGTTCAGGTGGCTCTTGCTGAATCAAGAGTTATAGTTGTTCATGCCAACACTCTTTGGGGCCCGAAAGTGTTTAGTGTCGCGAAGAATCTTGGAATGATGGGAACTGGTTATGTATGGATAGCCACTGCTTTCCTTTCTGCTATTCTTGATATAAGCAGTCCTTTATCTTCTGATGCAATGGATGAAATCCAAGGAGTGTTGACACCACGCGTGTACACTCCGGATTCGGAGCTTAAAAGAAAGTTTGTTTCTAAATGGAAAAACTTGACCATTGGAAATACTTCAAATGGCCCTCTTGGACTTAGTTTTTTGTCTCTCTATGCATATGATACTATTTATGCTCTTGCTCATGCACTTGATGCATTTTTGAAACAAGGCAACCAAATCACATTCTCAAATGATTCAAAGTTATCTACACTACGTGGAGACAACTTGCGTCTTGATGCACTGAACATCTTCGATGGAGGAAACTCACTGCGTAGGAACATTTATGAAGTTAACATGACAGGTGTGACAGGCTTGTTCAAGTATGCACCTGATAAAAACCTTGTCAATCCTGCATATGAAATCATCAATGTGGTTGGAACCGGGTCCCGGAGGATCGGTTATTGGTCTAATCACTCTGGATTATCGGTCGTTCCTCCTGAAACACTTCAGTCCAAACCAGGCAATAACTTCAGGGAAAGTAAAATGCTATTCCCTGTGATTTGGCCTGGAGACACAGCTCAGAAGCCTCGCGGTTGGGTTTTTCCAAACAATGGAAGGCTATTAAGAATTGGAGTACCAATAGGCGTTAGTTACCGCCAATTTGTCTCGCAAGTACAAGGCACTGATACATTTCAAGGATTCTGCATTGATGTATTTCTTTCTGCAGTTAACCTATTGCCTTATGCTGTCCCTTATAAGTTTATTCCATATGGGGATGGTAAGAACAATCCTAGTAACACTGAGCTTGTCCGTCTGATAACAACTGGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAACAAGAACAAAAATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTTTAGTGGTAGTAGCACCTGTTAGGGAGACAGAAACTAGTGCTTTGGCCTTTTTGGCTCCATTTACACCAAGGATGTGGTTTGTCACAGCTCTCTTTTTCATAATAGTTGGAACTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCTAAAAAACAAGTGGTTACTATTTTTTGGTTTAGCTTTTCAACAATGTTCTTTTCACATAGGGAAAATACAGTGAGCACATTTGGTCGTTGTGTGTTACTTATATGGTTATTTGTAGTTCTTATAATTACTTCAAGTTACACAGCTAGTCTTACATCAATCCTCACAGTACAACAGCTTTCTTCCCCCATTAAAGGCATTGAAAGTTTAGTAGTTGGCAAAGAACCAATAGGTTACACTCAAGGTTCTTTTTCTAAAGGTTATTTAATCCAAGAAATTGGTATTCACGAGTCTAGGCTTGTTCCTTTAAAAACACCTGAAGAAGCTGCTAGAGCACTTGAGAAGGGTCCTCAAAATGGCGGTGTTGCTGCTTATATCGATCAACGTGCCTATATCGACATCTTCCTTGCAAGCCGGTGTAAATTTACTATTGTAGGTCAAGAGTTCACCAGAAACGGCTGGGGATTTGCCTTTCCAAGAGACTCACCATTAGCAATTGACCTATCAACTGCCATTTTGCAAATGGTAGACAATGGGGACTTGCAAAGGATTCATGACAAATGGCTTTTGAGTAGAGCTTGTTTATCACAAGGTGCAAAGCTTGAAGTTCAAAGACTAAAACTAAAAAGCTTTTGGGGTCTATATGTGATTTGTGGTTCAGCCTGTTTGTTTGCTCTACTCATATATTTAATACAGATAATTAGACAGTACATCAAGCACCGCTCAGAGGAACTTGATTCTCCTAACCAAAACCCTAGCTCAGGATCCTCACGTTTGAAAAGTTTCATGTCCTTTGTAGATGAAAAAGAAGAGACTGTCAAGAACCGATTGAAGAGAAAGAAAATGGAGAGAATCTCTTATAGAGGTAGTGAGGGAGGATCATCCTCCATCATCTCCAATAAAGATTATGATGCTCAGCCATCTTCACGCATAGCTGATTCTGTTCCTAATTGTAGAAGTGAACAAGTATTTATTAAAGTGGTGTAA 2859 0.4015 MVKVWLLALMILLYNGFPSTVADIHNSTRPDVVNIGALFSFNTSVGRIIKIAIEAAVEDVNSDPNILGETKLKLSLQEDSKYRGFLSIAEVLQVMARHNVAIIGPHSSVTAHVITHIANELQVPLLSFSALDPTLSSLQFPFFIRTCHSDLYQMAAIADLVDYYGWKEVIAVYIDDDNGRNGIGALGDKLSEKRCRISYKAPVSPEATTEEITNVLVQVALAESRVIVVHANTLWGPKVFSVAKNLGMMGTGYVWIATAFLSAILDISSPLSSDAMDEIQGVLTPRVYTPDSELKRKFVSKWKNLTIGNTSNGPLGLSFLSLYAYDTIYALAHALDAFLKQGNQITFSNDSKLSTLRGDNLRLDALNIFDGGNSLRRNIYEVNMTGVTGLFKYAPDKNLVNPAYEIINVVGTGSRRIGYWSNHSGLSVVPPETLQSKPGNNFRESKMLFPVIWPGDTAQKPRGWVFPNNGRLLRIGVPIGVSYRQFVSQVQGTDTFQGFCIDVFLSAVNLLPYAVPYKFIPYGDGKNNPSNTELVRLITTGEFDGAVGDIAITTTRTKMVDFTQPYIESGLVVVAPVRETETSALAFLAPFTPRMWFVTALFFIIVGTVVWILEHRVNDEFRGPPKKQVVTIFWFSFSTMFFSHRENTVSTFGRCVLLIWLFVVLIITSSYTASLTSILTVQQLSSPIKGIESLVVGKEPIGYTQGSFSKGYLIQEIGIHESRLVPLKTPEEAARALEKGPQNGGVAAYIDQRAYIDIFLASRCKFTIVGQEFTRNGWGFAFPRDSPLAIDLSTAILQMVDNGDLQRIHDKWLLSRACLSQGAKLEVQRLKLKSFWGLYVICGSACLFALLIYLIQIIRQYIKHRSEELDSPNQNPSSGSSRLKSFMSFVDEKEETVKNRLKRKKMERISYRGSEGGSSSIISNKDYDAQPSSRIADSVPNCRSEQVFIKVV* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0890 952 Gene3D - 468 584 - -
Mal6g0890 952 SUPERFAMILY Periplasmic binding protein-like II 447 815 - -
Mal6g0890 952 Gene3D - 51 401 - -
Mal6g0890 952 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Mal6g0890 952 Gene3D - 149 426 - -
Mal6g0890 952 CDD PBP1_GABAb_receptor_plant 34 430 IPR044440 -
Mal6g0890 952 Pfam Ligand-gated ion channel 814 845 IPR001320 GO:0015276|GO:0016020
Mal6g0890 952 Gene3D - 704 816 - -
Mal6g0890 952 Gene3D - 585 703 - -
Mal6g0890 952 MobiDBLite consensus disorder prediction 913 935 - -
Mal6g0890 952 SUPERFAMILY Periplasmic binding protein-like I 28 465 IPR028082 -
Mal6g0890 952 PIRSF IGluLR_plant 1 939 IPR017103 -
Mal6g0890 952 PANTHER GLUTAMATE RECEPTOR 3.6 14 932 - -
Mal6g0890 952 Pfam Bacterial extracellular solute-binding proteins, family 3 493 813 IPR001638 -
Mal6g0890 952 MobiDBLite consensus disorder prediction 911 935 - -
Mal6g0890 952 Pfam Receptor family ligand binding region 51 411 IPR001828 -
Mal6g0890 952 CDD GluR_Plant 473 813 - -
Mal6g0890 952 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0890 Mal-Chr6 13363147 13367083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0890 5 914 Ion Channels AT3G51480 58.507 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0890 K05387 - gmx:100785258 1496.49