Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0887 ATGAAGATAGAGAGTCCCAGAAAAGCCTCTTCGGTCTCAAGCAATCATCACGATACCCACTGTGTTCTCCCTTGGATTCCGACAATAATTCCACCACCGGAACAACCAGACAAGGTTACCACTTATATCAATAATTATGGTGTTTTTCTTGCATTATTTTACACTTTCAATTATGCTGTTAGAGATATTGTTCCCACCACACAACATTTGGCATCAACAATACACTCAAATTTGTATTCAATTTCAAATCTGCAAACTGCATTCCAACTGTTTGATGAAATGTCAAAGAGACATGTAGTTGTTTGGAATGTTATTGTGAAAAGTTCAAGGCATTCTCATGAAGGGAAGACCGTGTTTCTCCCTGAATTGTCCATTGGTTTAAGGCACAAGAATTTGGTTCAGTTACTGGGTTGGTGTGTTGAGAAAGGTGAGCTGGTTCTTGTTTATGATTTCAGGCTTAATGGAAGCTTAGACAAGATGATTTCCAAAGAACCTAAGATAGGGAAATTGTTGAGTTGGTCTCGTAGGGTTAATATTGTTGTTGGATTGGCTTCTATTTTGGTTTATCTCCATCAAGAATATGAGCAAAGAGTGATTCGTAGAGATATCAAAACTGGAAATGTTTTGTTGGATAGAAATTTGAATCCTAGGTTGAGTCATTTTGGATTGGCTGAACTCATTGATCATGATAAGTATTATAGTTCAACTTTAATTGCTGAAACAATGGAATACCTTGCATCAAACTATCTTCAATGTAATTGTGTTTCCTTAGTTTTATATGGAGTTTTGTTAAGCTACAAAATTGAGTTTTCTACTCATGTTGCAATAGAATTGGTGCATGTCTTATTTGCCTCGATCCACAAAGTCTTTGGAGACAAGGTTGTTTTATTAATGCATCTTGAGTTTTATTCCTTGAGGAGGCAGGAGCTGAATTTAAAATATGTTCTGCAAGATCATGCAAATGTTTTTTTCTCTATGGTTGATTTTGAAATTGTAAAATATTCTGCTGTGAACAATGTTTTGAAGGTGAGAAGTATTTCAATACATGAAGTTGTTCTCGAATTGGCCTCTGAAGTTTACTTTGCAGCATATTCCAGGAAAGGCATCTGTTATGAACTTTCTTTTGTAGCCCTTTTGAAATAA 1143 0.3552 MKIESPRKASSVSSNHHDTHCVLPWIPTIIPPPEQPDKVTTYINNYGVFLALFYTFNYAVRDIVPTTQHLASTIHSNLYSISNLQTAFQLFDEMSKRHVVVWNVIVKSSRHSHEGKTVFLPELSIGLRHKNLVQLLGWCVEKGELVLVYDFRLNGSLDKMISKEPKIGKLLSWSRRVNIVVGLASILVYLHQEYEQRVIRRDIKTGNVLLDRNLNPRLSHFGLAELIDHDKYYSSTLIAETMEYLASNYLQCNCVSLVLYGVLLSYKIEFSTHVAIELVHVLFASIHKVFGDKVVLLMHLEFYSLRRQELNLKYVLQDHANVFFSMVDFEIVKYSAVNNVLKVRSISIHEVVLELASEVYFAAYSRKGICYELSFVALLK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0887 380 Pfam Protein tyrosine and serine/threonine kinase 102 246 IPR001245 GO:0004672|GO:0006468
Mal6g0887 380 ProSiteProfiles Protein kinase domain profile. 64 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0887 380 SUPERFAMILY Protein kinase-like (PK-like) 104 326 IPR011009 -
Mal6g0887 380 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 103 252 - -
Mal6g0887 380 Gene3D Transferase(Phosphotransferase) domain 1 153 265 - -
Mal6g0887 380 Gene3D Phosphorylase Kinase; domain 1 76 151 - -
Mal6g0887 380 SMART serkin_6 102 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0887 380 PANTHER - 103 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0887 Mal-Chr6 13248511 13250456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0887 106 276 Receptor kinase-like Gene Family AT5G55830 57.714 1.96e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal6g0887 PK_Tyr_Ser-Thr 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0887 - - adu:107496163 219.55