Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0886 ATGAAGCAATTTTCTTTCTTTTTCCCTATATTTTGGTATGTATACCTTCATCTCATTCTTTTAGTCCTTTCTTTAAACTTAACTTGGTTTTGCTCAAACAAAACTGTAGCACTAGCAGAGGCCTTGACATTAGGTAACCAGACTGATCATCAAGCATTGCTCCGAATCAAGGAATCGATATCTGACCCGAATGGAGTCATAGATTCTTGGAATTCTTCCATTCACTTCTGCAACTGGCATGGAATCACATGCAATCCCATGCATCAAAGAGTTACAAAGTTGAACTTACAAGGATACAACTTGCATGGATCCATGTCTCCTTACATTGGCAATCTCTCTCGTATAAGAAACATCAACCTTGAAGATAATAAATTCTTTGGAAAAATTCCACAGGAACTCGGTCGGTTGTTACAATTGCATCGACTTTTGCTCAACAATAACTTGTTTGCAGGAGAAATTCCTACGAACTTGACAAATTGCTTGAATCTTAAAGTCTTGCACTTATACGGAAACAATCTAACCGGCAAAATACCAACTGAAATTGGTTCTCTTCAAAAGCTTATTATACTGAACATTGGACAAAACAATTTAACAGGAGGAATCTTGCCATTCATAGGTAATCTTTCTTCCTTGATAGGTTTTGGTGTTGTTTACAATCACTTAGAGGGAGATATTCCACGAGAAATATGTCGCCTAAAAAATTTGAAAATAATAACAGTAGCAGCCAACAAATTATCAGGTATATTTCCACCTTGTCTCTACAATATGTCATCTCTTACCAACATCTCAACTGCAGAGAATCACTTTAGTGGCTCTCTTCCATCAAATATGTTCCAAACTCTCCCTAATCTCAATTCTTTTGAAATAGGCGGGAATCAAATCTTAGGTTCGATACCAACTTCCCTTGAAAATGCTTCGACTTTGGAATTATTTGACATTAGTGGAAACCATTTTGTTGGACAAGTTCCAAGTCTAGGGAAGCTACAAGATCTTTATTCGCTAAATTTTGAAACGAACATTCTAGGTGACAATTCAACTAAAGATTTAGAGTTTTTGAAAACATTGATAAATTGTAGTAAGTTAGAAGTGCTTGGTATAGATGCTAATAATTTTGGAGGTTGGCTGCCAAATTCCGTGGGCAATTTATCCTCCCAACTTAGTCAACTATACCTCGGGGGTAATGAGATATCAGGAAAAATTCCCAGAGAGTTAGGAAATCTAGTAAGCTTAACTCTCTTGAGCATAGGACATAACCATTTTGAAGGAATTATTCCTGATACTTTTGGAAACTTCCAAAACATGCAAAAGTTAGATTTGCGTCAAAACAAGTTATCAGGAGATATACCATCTTTCATAGGCAACCTCAGTCAATTGTATGATTTGCATATGGAAGAAAACATGTTAGAAGGAAATATTCCTTTGAGTATAGGGAAATGCCAAAAGTTACAATATCTAAACCTTTCGCAAAACAACCTTCGAGGAGCCATACCCTTAGAAGTTTTTAGCATTTTTTCCTTAACAAAAGGATTGGACTTATCACATAATTCATTGAGTGGTAGTTTACCTGATGAAGTGCGTTTGCTAAAAAATATTGATAAGCTAGATGTCTCTGAAAATCATCTGTCGGGTGAAATTCCAAGAACCATTGGTGAATGCGTAAGTTTAGAATACCTTCATTTACAAGGGAACTCGCTTCACGGAACCATACCTTCCACTTTGACATCTCTCAAAGGTCTTCAATATTTAGACTTGTCCAGAAATCAGTTGTCTGGATCAATTCCTAAAGGTCTGCAAGATATTTTTTTCCTAGAATACTTCAATGTATCTTTCAACATGTTGGAAGGTGAGGTTCCAATCAAAGGCGTGTTTCGAAATGCAACCGGGTTAGCAGTGACTGGAAACAATAAGCTTTGTGGAGGAATTTTAGAGCTGCATCTATCTCCATGCCCTGTCAACTTTACAAAACACCATAATTCTAGGTTGATAGCAGTGATAATTAGTGTGATTGCTTTCCTTCTTATAATGCTATTTATTCCAATGATGTACTGGATGAGGAAAAGAAGAATGGAATCATCTTTAGATACACCAACAATGGACCAGCTTGCTAAGGTTTCATACCAAGAACTACATCATGGAACTGATGGGTTCTCAGATAGAAACTTGATTGGTTCAGGAAGTTTTGGTTCTGTATACAAAGGAATTCTTGAATCACATGATAAAGTTGTTGCTATAAAGGCTCTGAATCTCAAAAAGAAGGGAGCTCATAAAAGTTTTATTGCCGAATGTAATGCACTCAAAAATATTAGACATCGAAATTTGGTCAAGATTTTAACATGTTGTTCTAGTACTGATTATAAAGGTGGAGAATTTAAAGCTTTGGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGCTTCATCCATGGACAGTGAATTCAGAGTATCCTAGAACATTGAACCTTGGTCAAAGATTAAATATCTCCATTTATATTGCTTCTGCATTACATTATCTTCATTATGAATGTGAGCAATTGGTCCTTCATTGTGATATAAAGCCGAGCAATGTCCTTCTCGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGGCTTGTCTCAACCATTGACAGTACCTCTCATAAGGAAATTAGTACAACTATTTCAACAGGCACCATTGGCTATACTCCCCCAGAGTATGGAATGGGTTCTAAAGTGTCGACATACGGTGACATGTATAGCTTTGGGATGCTTATGTTGGAAATGATCACCGGAAGAAGACCTACCGATGAAAGATTTGATGATGGTCAAAATCTACGTTCGTTTGTTGAAAATTCTTTAGATGATAATCTTTTACAGATTTTGGACCCACATCTTGTACCAAGAGATGAAGAAGCAGCAATAGAAGATGGAACTAGAGAGAATCTTATTCCAGCTATAGAGAATTGCTTAGTTTCACTTTTAAGGATTGGACTTGCTTGTTCTGTGGAATCACCAAAAGAAAGAATGAACATAGTAGATGTTACTAGAGAGCTAGATATAATCAGAACAATCTTTCTTGATGGTGTTCATGCTCGCGAGTAA 3093 0.3644 MKQFSFFFPIFWYVYLHLILLVLSLNLTWFCSNKTVALAEALTLGNQTDHQALLRIKESISDPNGVIDSWNSSIHFCNWHGITCNPMHQRVTKLNLQGYNLHGSMSPYIGNLSRIRNINLEDNKFFGKIPQELGRLLQLHRLLLNNNLFAGEIPTNLTNCLNLKVLHLYGNNLTGKIPTEIGSLQKLIILNIGQNNLTGGILPFIGNLSSLIGFGVVYNHLEGDIPREICRLKNLKIITVAANKLSGIFPPCLYNMSSLTNISTAENHFSGSLPSNMFQTLPNLNSFEIGGNQILGSIPTSLENASTLELFDISGNHFVGQVPSLGKLQDLYSLNFETNILGDNSTKDLEFLKTLINCSKLEVLGIDANNFGGWLPNSVGNLSSQLSQLYLGGNEISGKIPRELGNLVSLTLLSIGHNHFEGIIPDTFGNFQNMQKLDLRQNKLSGDIPSFIGNLSQLYDLHMEENMLEGNIPLSIGKCQKLQYLNLSQNNLRGAIPLEVFSIFSLTKGLDLSHNSLSGSLPDEVRLLKNIDKLDVSENHLSGEIPRTIGECVSLEYLHLQGNSLHGTIPSTLTSLKGLQYLDLSRNQLSGSIPKGLQDIFFLEYFNVSFNMLEGEVPIKGVFRNATGLAVTGNNKLCGGILELHLSPCPVNFTKHHNSRLIAVIISVIAFLLIMLFIPMMYWMRKRRMESSLDTPTMDQLAKVSYQELHHGTDGFSDRNLIGSGSFGSVYKGILESHDKVVAIKALNLKKKGAHKSFIAECNALKNIRHRNLVKILTCCSSTDYKGGEFKALVFDYMKNGSLEQWLHPWTVNSEYPRTLNLGQRLNISIYIASALHYLHYECEQLVLHCDIKPSNVLLDDDMVAHVSDFGIARLVSTIDSTSHKEISTTISTGTIGYTPPEYGMGSKVSTYGDMYSFGMLMLEMITGRRPTDERFDDGQNLRSFVENSLDDNLLQILDPHLVPRDEEAAIEDGTRENLIPAIENCLVSLLRIGLACSVESPKERMNIVDVTRELDIIRTIFLDGVHARE* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0886 1030 Gene3D Phosphorylase Kinase; domain 1 697 797 - -
Mal6g0886 1030 SMART serkin_6 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0886 1030 SUPERFAMILY L domain-like 358 639 - -
Mal6g0886 1030 Gene3D Ribonuclease Inhibitor 346 649 IPR032675 -
Mal6g0886 1030 Gene3D Transferase(Phosphotransferase) domain 1 798 1022 - -
Mal6g0886 1030 PANTHER OS04G0122200 PROTEIN 34 1025 - -
Mal6g0886 1030 SUPERFAMILY Protein kinase-like (PK-like) 688 1015 IPR011009 -
Mal6g0886 1030 PANTHER LRR RECEPTOR-LIKE KINASE 34 1025 - -
Mal6g0886 1030 Pfam Leucine rich repeat N-terminal domain 47 85 IPR013210 -
Mal6g0886 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Mal6g0886 1030 SMART LRR_typ_2 576 599 IPR003591 -
Mal6g0886 1030 SMART LRR_typ_2 407 430 IPR003591 -
Mal6g0886 1030 SMART LRR_typ_2 431 455 IPR003591 -
Mal6g0886 1030 SMART LRR_typ_2 528 552 IPR003591 -
Mal6g0886 1030 SMART LRR_typ_2 256 280 IPR003591 -
Mal6g0886 1030 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Mal6g0886 1030 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Mal6g0886 1030 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Mal6g0886 1030 Gene3D Ribonuclease Inhibitor 206 345 IPR032675 -
Mal6g0886 1030 Gene3D Ribonuclease Inhibitor 46 204 IPR032675 -
Mal6g0886 1030 Pfam Protein kinase domain 718 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0886 1030 SUPERFAMILY L domain-like 47 340 - -
Mal6g0886 1030 ProSiteProfiles Protein kinase domain profile. 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0886 Mal-Chr6 13241687 13244969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0886 38 1023 Receptor kinase-like Gene Family AT3G47570 45.854 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0886 Pkinase 4.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0886 - - gmx:100785561 1308.89