Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0884 ATGGGTATTGTTTCTTGGTTGATCAAGAATCAAGTTTTGGTTTCAGGGACTAATGTATTCTGTCGAGGTAGTAACAAAGTTGTCAAAAGAGGGAGTTTATTTGGTGATGGTATAGTTTGTGATTGTTGTCGTGTTAATTTTTCGATCACTGGTTTCGAGAGTCATGCTGGTTGTACAAGACATAGACCATCCACTAGTATCTTCTTGGAAGATGGAAGGTCGTTGTTGGAATGTCAAAGGGAAGCTCCGAGTTCGCGTGATCATAAAGAGAATCATTGTGTTGTCAAAGAAAATCAAAAGAAGAATCAGTGTGCTGTCAAAAAAAATCAAGAGAAGAATCATTGTGCTGTCAAAGAAAATTGTGAAGCAAGTAATGATAATGTTTGTTCTATTTGTTGTTCTATTTGTTGTTTTGGAGGTGACATAGTACTATGTGATCGATGTCCTTCTGCATTCCACCTCAGTTGTTTAGGTCTCAAACGAGTTCCGGATGGTGACTGGTTCTGTCCAACTTGTTGTTGCAAAATATGCTATCGACCCAAATGCAAACAAGAATGTAAAGATCACAAGGATAACAATTTTCTTGTATGTGTTCAATGTGAGCAAAAATATCACTTTGGATGCGTAAAGTCTATAGGAATCGAATTTAATCACATGGAGAGCAATGCTGAAAAGAATAATTGGTTTTGCAGTGTAGTTTGTGGGAACATGTTCTTCTGTCTAAAGAAGTTGTTAGGAAAACCAATTAAGGTTGCAGATAATCTAACTTGGACATTGGTGAAGAATGTGAATAGTGATTATGATGATGATGGTGGTAGTCAAATGGAGACTAAGTTGAATATGGCTCTTGGTGTACTGTATGAGGGTTTTAATCCAGCCATTGATGCTTTAACAGGGAGAGAGTTGATTAGAGATGTTGTTTTTAGTAGATACTCAGAACATAAACGCTTGAACTTTCGTGGTTTCTATAACGTGATTTTGGAGAAAATGGGTGAAGTGATTTCAGTGGCAACTATAAGGATTTATGGTCAAAAAGTTGCAGAGATAGTTTTCGTGGCCACCAAGAAACAATATCGACGACAAAGAATGTGTCATTTGTTGATGGATGTGCTTGAGAAACAATTGACTCACTTAGGAGTTGGGAAATTGGTTCTGCATTCCTCTGAGGATGGTGTAAACACTTGGACAAAATCATTTGGTTTTGCTAGGATAACTAGTAAAGATAAGTGTCAGTTTATTGATCATACTCTTTTAGAACTTGAGGACACTATCATGTGCCTTAAACCACTGAATAGGCCTTGCATGGCTTGA 1311 0.3722 MGIVSWLIKNQVLVSGTNVFCRGSNKVVKRGSLFGDGIVCDCCRVNFSITGFESHAGCTRHRPSTSIFLEDGRSLLECQREAPSSRDHKENHCVVKENQKKNQCAVKKNQEKNHCAVKENCEASNDNVCSICCSICCFGGDIVLCDRCPSAFHLSCLGLKRVPDGDWFCPTCCCKICYRPKCKQECKDHKDNNFLVCVQCEQKYHFGCVKSIGIEFNHMESNAEKNNWFCSVVCGNMFFCLKKLLGKPIKVADNLTWTLVKNVNSDYDDDGGSQMETKLNMALGVLYEGFNPAIDALTGRELIRDVVFSRYSEHKRLNFRGFYNVILEKMGEVISVATIRIYGQKVAEIVFVATKKQYRRQRMCHLLMDVLEKQLTHLGVGKLVLHSSEDGVNTWTKSFGFARITSKDKCQFIDHTLLELEDTIMCLKPLNRPCMA* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0884 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 237 IPR013083 -
Mal6g0884 436 ProSiteProfiles Zinc finger PHD-type profile. 126 175 IPR019787 -
Mal6g0884 436 SUPERFAMILY FYVE/PHD zinc finger 122 183 IPR011011 -
Mal6g0884 436 Gene3D - 293 413 - -
Mal6g0884 436 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 3 433 - -
Mal6g0884 436 SMART PHD_3 132 173 IPR001965 -
Mal6g0884 436 SMART PHD_3 181 234 IPR001965 -
Mal6g0884 436 Pfam Acetyltransferase (GNAT) family 310 401 IPR000182 GO:0016407
Mal6g0884 436 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 320 414 IPR016181 -
Mal6g0884 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 174 IPR013083 -
Mal6g0884 436 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 285 423 IPR000182 GO:0016407
Mal6g0884 436 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 3 433 - -
Mal6g0884 436 Pfam Tify domain binding domain 31 82 IPR032308 -
Mal6g0884 436 CDD NAT_SF 325 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0884 Mal-Chr6 13231359 13232669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0884 3 378 PHD Transcription Factor Family AT5G58610 41.299 1.07e-85 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0884 - - mtr:MTR_5g024390 722.235