Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0882 ATGAATCATTTCGTTTCAATCTTCATCTTCATCATCATCATCACAATCTTCACCACCTGCATCGTTGCAGATGTATCCACCTCCCAATCCCAACAAGTCTCCCTTCTCCTCCACAACGAAAACGGTCTCGCTCCTTCTCCTCCGGCTCTTCCACCGTCACCGTTGATTTCCAATTCATTGGACAGAAAACCTGCTACGGCACTCGTGGCTGGCTTAGACGGAACTGTTTATCTGGTGGAAAGTGCTTCCGGGAGGGTACTTTGGTCTTTTTCATCTGGTTCACCGATCTATCATTCCTCTGCCAATACTCCTTCTTCTGGACTTATTGAATGTGGTGATGACTGGGAGTTAATCTTTCATGATACCCACTTTGGTAAAACGAGACTCAAGGAATCTGTTGCTGATTATGTTGCTGTTACACCTATTGTGTCAAAAGATGGTGCTGTTATACTTGGATCCAAAAGGAGCACTGTATTTGAAGTGGATGCTAAAACAGGAAAGCTCCTTAGAAGCTATAGTGCTTCTGATTTTCATAATGCTTCTACTACTGCAATGTGGAGTGGTGACAAGGGCAGTGAGGGTGTTACTAACGACTTCCGTGCAAATAATAAAGAGCTTGCTGATCCAGCAAAGCTTAATTTACCAGAGTTTTTGCTCCAGATAGTTAGGACTGATTATTTTTTAAAATCTGTGGGTCCTGGTTCAGGAATAGTGTTGTGGACTATGTCAGTAGCTGAATTTGAGGCTATATTATTTTGCCACCATAACGAAAATCCTACGTTGACAGCTTCACTTGATGCAGAAGGTGAGTATGCTTCTGATGTTGACAGTGGCTTGGATTTTACTATGCCGTATGCGTGTCCTGACAGAAAACTCAGAGAAATCTATCGTCAGCGAAAGAATTTTCTGTTTGAACCTGATAAAATTGAAAGATTATCTGAAATTGATGTGTATCAAGAGAACGGTATGCTCCCAATGCTGGCTTTAAAGCTGATGCTTCCATCACAACCTAAGATTGATAGATTCCTCCCTGGTCATGGTGGTAATATGATGCTTCCTGTGCCTGTGCCTGTGCCTAATTATATGCAACCGAAAATCACCTATGATAGTAATGATAATGCAGTTATGCTCCCTCAGCCTCCTATGGAGATCACTGCACCAAAGGAAGTTGATCTGAACAGGGTGATTGAATTATCATTATTAGTTTTATTATCTGTGGTCTTTCTTTTAATACTGTACCAAAATCGATCTACAAATAAAGTTATATCAAAGGTCCAAATCAGCGACTCAGATTTGAAAAGTTCACCTTCTAAGAAAAAGAGAGTACGTAAGTCAGGAAAAAACAATGTCATTGGTGACAAACAGGTTAATAATCTGTCTTCAGTTGAGGAGAATATACGAATTCATAAGGAAGCAGAAAATGAAGCACGGTTGCACTATAATAAAGTTAATGGGCGCAAGATCGGTAAACTGCTTGTATCAAATAAAGAAATTGCCAAGGGAAGTAATGGCACCATTGTCCTTGAGGGGATATATGAAGGTCGAGTAGTTGCTGTTAAACGTCTTGTTCAGGCTCATCATGATGTAGCTCATAAAGAAATTCAAAATCTCATTGCTTCTGACTTTCATCCAAATATTGTCCGATGGTATGGCGTGGAATATGATCACGATTTTGTTTACCTTGCTCTGGAGCGTTGTGCGTGCAACTTGGATGATTTGATTACTTTTTATTCAGATTTGTCAGAAAACTCGGTGTTAAGTGAGGATCAAGCTTCTGATTTTTTTAAGAAGGCCCAGATAGAGGCACAAAGGGATGATATGCAGTGTCTTTGGAAATCAAATGGTTATCCATCTCCACTTTTACTAAAGTTGATGAGGGATGTGGTTTCTGGGCTTGTCCATTTGCACGAACTAGGAATAATACATCGGGATTTGAAACCCCAAAATGTTTTATTAATCAAGGAAAGATCATTATGTGCCAAACTTTCTGATATGGGGATTAGTAAACGACTTCTTGAAGATATGTCTTCTTTAGGCCATAGTTCTACTGGCTGTGGCAGTTCGGGTTGGCAAGCGCCAGAGCAACTTGTTCAGGGACGTCAAACACGGGCTGTAGACTTGTTTAGTTTAGGTTGTGTCCTCTTTTTTTGTATGACAGCAGGAAGACATCCATTTGGAGAACGTCTTGAGCGTGATGTCAACATTGTTAAAAATAAGAAAGATCTTTTCTTAGTGGAGTTCCTTCCTGAAGCTGAGGATCTTATTTCCTGTTTATTAAACCCTGACCCCAATCTAAGGCCAAAGGCGATTGAAGTATTGCATCATCCTCTATTTTGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGACGTCAGTGACAGGGTGGAACTTGAAGATAGAGAGACTAATTCCGTTCTTTTGAATGTATTAGAGAGCACTGCTCCAGTGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAATCAGCTTTCATTGCCAACATTGGTCGTTACAGGCGATATAAATTTGACAGCGTCCGAGACTTGTTGAGGGTCATGAGAAACAAGCTAAATCATTTTAGGGAGTTGCCTGTAGAAATTCAGGAACTGATAGGACCTATTCCGGAAGGATTCAATGAGTACTTTGCAAGTCGATTTCCTAGGCTCTTGATTGAAGTGTACAAAGTTATCTGCGACTATTGCAAGGATGATGAATGTTTTCAAAGATATTTTAGAGACATTGATTAA 2745 0.4033 MNHFVSIFIFIIIITIFTTCIVADVSTSQSQQVSLLLHNENGLAPSPPALPPSPLISNSLDRKPATALVAGLDGTVYLVESASGRVLWSFSSGSPIYHSSANTPSSGLIECGDDWELIFHDTHFGKTRLKESVADYVAVTPIVSKDGAVILGSKRSTVFEVDAKTGKLLRSYSASDFHNASTTAMWSGDKGSEGVTNDFRANNKELADPAKLNLPEFLLQIVRTDYFLKSVGPGSGIVLWTMSVAEFEAILFCHHNENPTLTASLDAEGEYASDVDSGLDFTMPYACPDRKLREIYRQRKNFLFEPDKIERLSEIDVYQENGMLPMLALKLMLPSQPKIDRFLPGHGGNMMLPVPVPVPNYMQPKITYDSNDNAVMLPQPPMEITAPKEVDLNRVIELSLLVLLSVVFLLILYQNRSTNKVISKVQISDSDLKSSPSKKKRVRKSGKNNVIGDKQVNNLSSVEENIRIHKEAENEARLHYNKVNGRKIGKLLVSNKEIAKGSNGTIVLEGIYEGRVVAVKRLVQAHHDVAHKEIQNLIASDFHPNIVRWYGVEYDHDFVYLALERCACNLDDLITFYSDLSENSVLSEDQASDFFKKAQIEAQRDDMQCLWKSNGYPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLLIKERSLCAKLSDMGISKRLLEDMSSLGHSSTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNKKDLFLVEFLPEAEDLISCLLNPDPNLRPKAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDRETNSVLLNVLESTAPVALGAKWDEKMESAFIANIGRYRRYKFDSVRDLLRVMRNKLNHFRELPVEIQELIGPIPEGFNEYFASRFPRLLIEVYKVICDYCKDDECFQRYFRDID* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0882 914 ProSiteProfiles Protein kinase domain profile. 492 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0882 914 SMART ire1_9 141 173 IPR018391 -
Mal6g0882 914 SMART ire1_9 58 91 IPR018391 -
Mal6g0882 914 Gene3D - 44 257 IPR015943 GO:0005515
Mal6g0882 914 Gene3D Transferase(Phosphotransferase) domain 1 602 780 - -
Mal6g0882 914 Pfam Ribonuclease 2-5A 784 910 IPR010513 GO:0004540|GO:0006397
Mal6g0882 914 SUPERFAMILY Protein kinase-like (PK-like) 495 801 IPR011009 -
Mal6g0882 914 CDD RNase_Ire1 782 910 - -
Mal6g0882 914 Gene3D KEN domain 781 913 IPR038357 -
Mal6g0882 914 Gene3D Phosphorylase Kinase; domain 1 478 564 - -
Mal6g0882 914 SMART PGNneu 843 897 - -
Mal6g0882 914 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 66 185 IPR011047 -
Mal6g0882 914 PANTHER IRE1-RELATED 62 910 IPR045133 GO:0004521|GO:0004674|GO:0030968
Mal6g0882 914 SMART serkin_6 492 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0882 914 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 62 910 - -
Mal6g0882 914 ProSiteProfiles KEN domain profile. 781 912 IPR010513 GO:0004540|GO:0006397
Mal6g0882 914 Pfam Protein kinase domain 495 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0882 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0882 Mal-Chr6 13202698 13208448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0882 518 777 MAP Kinase Kinase Kinase AT3G06030 28.030 1.15e-21 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mal6g0882 Pkinase 3.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0882 K08852 - gmx:102661527 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0882 6 13202698 13208448 Mal5g3225 5 94565362 94573961 PCT