Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0857 ATGCTTGTGTGTCGCCGCCGCCACAAGTCCGACATGGCTTACCTCACCGCCGTCATCAGCATTCTCCTCCTCTTCCCGGCGGCAACCTCCCAAGCTCAAATCCTCAAAAAAGAAACTCACATTTTCGGACCCTTCAATAACACCAACTCCAACCTCTTCGATGTTATACCCACCGCATCTATCAACCAAGGAGCTTTCCAAGTCACGCCGGACAGCATCGGAAGTTCAAAGCTCGTCCCTCTCTTCAACAACTCCGGCAGAATCTTTTTCAAAACACCCTTCAAACTCTGGGATGGTTCCGCCGCAGATCTCACCGGAAAAATAGCTTCCTTCAACACCTCTTTTCTCATCAACGTCTTCCGTGTCAACAACGCCACCCCCGGTGAAGGTCTGGCTTTCATCATCGCACCGTCTCTCACTATTCCTCTCAACAGCTCCGGTGGTTACCTCGGTTTAACAAACGCCACCACAGACGGTAACTCCACCAACCATTTTGTTGCAGTTGAACTTGACACGGTTAAACAAGACTTTGATGTTGACAACAACCACATCGGACTTGACATAAACGGTGTTCGTTCTAATGTTACAGTTCCTCTTGATTTTGAAATCGCTCCAAATGGAACTCAGTTCTATGTTTTATGGATTGAATATAACGGTGACCGGAGAAAGATTGATGTTTACATGGCGCCACAATCGTCACCGGATTTACCTATAGTAAAAAAACCGGTTAATCCAGTTTTGAGTTCGGGTTTGGATTTGAAAAAAGTGGTGAACCAAAAATCATATTTTGGATTTTCAGCTTCAACAGGTAACACTGTTCAGTTAAACTGCGTGTTGAGATGGAATATTTCAATTGAGGTTTTTGATGAAAAGAATAAAAATGGAAAAGCATTAACTATTGGTTTAGCTATTGGGGTTCCTTTATTGGTTTTGATTTTAGCTGGTGGTGGATTTGGGTATTATTATATGTTCAAGAAGAAGAAGAGTGATGAAGGTTCTACTTCTCAGATAATGGGGACATTGAAGAGTTTACCAGGAACACCGAGAGAGTATAGTTATCAAGAATTGAAGAAAGCTACGAATAATTTTGATGAAAAACATAAACTTGGACAAGGTGGATATGGTGTTGTTTATAGAGGAACATTACCTAAGGAAAAATTGGAAGTTGCTGTTAAGATGTTTTCAAGGGATAAGATGAAAAGTACTGATGATTTTTTAGCTGAACTTACTATTATCAACCGTCTTCGTCATAAACATCTTGTTAAGTTACAAGGATGGTGCCACAAAAACGGGGTATTACTCTTAGTATACGACTACATGCCAAATGGAAGCTTAGACAACCACATATTTTGTGAGGAAGGAACAAGTATAACCCCGCTAAGTTGGCATCTAAGGTACAAAATCCTCTCTGGTGTAGCTTCTGCCTTAAATTACCTGCACAACGAATATGATCAAACAGTAGTTCACAGAGACCTTAAAGCAAGCAACATAATGCTAGACGCAGATTTCAATGCCCGTTTGGGAGATTTCGGTTTAGCACGTGCACTAGAGAATGAAAAAACATCGTATGCAGAATTGGAAGGTGTCCAAGGTACGATGGGATACATAGCACCAGAATGTTTCCACACAGGAAGAGCTACAAGAGAATCAGATGTTTACGGATTTGGTGCCGTGTTACTTGAAACTGTTTGTGGTCAAAGACCATGGACTAAAATCGAAGGGTACCAATTTTTGGTTGATTGGGTTTGGTTTTTGCATCGTGATGGAAGGATATTGGAAGCAGTGGATCAAAGTGTTGGGAATGAGTATGTTGTTGAAGAGGCAGATAGGATATTGAAATTGGGATTGCTTTGTTCTCACCCTATTGCTAGTGAGAGACCTAATTTGCAAACAATTGTTCAGATTTTATCTGGGTCAGTTAATGTGCCTCATGTTCCACCTTTTAAACCTTCTTTTATGTGGCCAGCTGTGGATTTATCTAGTCTTGCAAGTACTGATTTTACAGCAACAAATACTAGTGACTACACACCAATCAATACTAGTAACTCACAATCTTCTATGCGTGTTCAATTCTCAAATAATAGCTCTCTGGTCTAA 2097 0.4092 MLVCRRRHKSDMAYLTAVISILLLFPAATSQAQILKKETHIFGPFNNTNSNLFDVIPTASINQGAFQVTPDSIGSSKLVPLFNNSGRIFFKTPFKLWDGSAADLTGKIASFNTSFLINVFRVNNATPGEGLAFIIAPSLTIPLNSSGGYLGLTNATTDGNSTNHFVAVELDTVKQDFDVDNNHIGLDINGVRSNVTVPLDFEIAPNGTQFYVLWIEYNGDRRKIDVYMAPQSSPDLPIVKKPVNPVLSSGLDLKKVVNQKSYFGFSASTGNTVQLNCVLRWNISIEVFDEKNKNGKALTIGLAIGVPLLVLILAGGGFGYYYMFKKKKSDEGSTSQIMGTLKSLPGTPREYSYQELKKATNNFDEKHKLGQGGYGVVYRGTLPKEKLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHKNGVLLLVYDYMPNGSLDNHIFCEEGTSITPLSWHLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDADFNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGRATRESDVYGFGAVLLETVCGQRPWTKIEGYQFLVDWVWFLHRDGRILEAVDQSVGNEYVVEEADRILKLGLLCSHPIASERPNLQTIVQILSGSVNVPHVPPFKPSFMWPAVDLSSLASTDFTATNTSDYTPINTSNSQSSMRVQFSNNSSLV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0857 698 PANTHER - 19 662 - -
Mal6g0857 698 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Mal6g0857 698 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Mal6g0857 698 Pfam Legume lectin domain 41 294 IPR001220 GO:0030246
Mal6g0857 698 Gene3D - 41 303 - -
Mal6g0857 698 ProSitePatterns Legume lectins beta-chain signature. 166 172 IPR019825 -
Mal6g0857 698 CDD lectin_legume_LecRK_Arcelin_ConA 41 282 IPR001220 GO:0030246
Mal6g0857 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Mal6g0857 698 ProSiteProfiles Protein kinase domain profile. 363 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0857 698 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 19 662 - -
Mal6g0857 698 Pfam Protein kinase domain 364 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0857 698 Gene3D Transferase(Phosphotransferase) domain 1 440 643 - -
Mal6g0857 698 MobiDBLite consensus disorder prediction 675 698 - -
Mal6g0857 698 SMART serkin_6 363 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0857 698 CDD STKc_IRAK 369 636 - -
Mal6g0857 698 SUPERFAMILY Protein kinase-like (PK-like) 344 636 IPR011009 -
Mal6g0857 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 288 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0857 Mal-Chr6 12810272 12813528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0857 84 666 Receptor kinase-like Gene Family AT5G55830 37.920 3.69e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal6g0857 Pkinase 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0857 - - gmx:100780014 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0857 6 12810272 12813528 Mal6g0857 6 12810272 12813528 ECH