Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0832 ATGCCACAAAATTGCATAGCACCAAAACCAGAATACTTTAATAGTACTCTCTCTTTGGAAGGATCACCACACATAACTGATCCTCCTAGCTCAAACAATGAACAATCATTACCAAAACTCATTATGCATCCTATAACTTTAAAGTTTGAGGATTTGGTGTACAAAGTGAAACTAAACCAAAAAGAGAAGACTATACTGAATGGAATCACAGGTGTGGTTTGTCCAGGAGAAATACTAGCTATGTTAGGGCCATCAGGCAGTGGCAAAACAACACTCCTTACAGCACTCGGAGGCCGTCTCAACGGTAAACTAACCGGAAAAACCACATACAACAATCAACCTTTCTCAGGTTCAATAAAGAGAAGAACAGGTTTTGTAGCTCAAGATGATGTTCTTTACCCTCACCTAACTGTGACCGAAACACTAGTGTTCACTGCACTTTTGAGGCTTCCTAAAACCTTAACAAGAGATGAAAAAGTTGTGCATGTAGAGAGAGTGATTTCTGAGTTAGGACTAAATAATTGTAGGAATAGTATGATTGGAGGACCACTTTTGAGAGGTATATCAGGTGGTGAAAAAAGGAGAGTGAGTATAGGACAAGAAATGCTTATAAATCCAAGCCTTTTGTTGCTTGATGAACCTACTTCTGGTTTGGATTCTACCACTGCTTTAAGGATCTTGAACACTATCAAAAGACTTGCTAGTGGTGGTAGAACTGTTGTTACAACAATTCATCAACCTTCAAGTAGACTCTACTATATGTTTGATAAGGTTGTCTTGCTATCTGAAGGTTGTCCTATCTATTATGGTCCTGCTTCAACTGCTCTTGAATATTTCTCATCTGTCGGTTTTTCCACTTGCGTGACCGTTAATCCAGCTGATCTCTTGCTTGATCTTGCAAATGGGATTGCTCCAGACTCTAAGCATGTAACTGAACAAAGTGAGGCATTGGAACATGAAAGGAAGACTGTGAGAGAATCTCTCATTTATGCTTATGACAAGAACATAGCTACAAGGCTAAAAGCTGAGGTTTCTAGCATGGAAGTGAACAACTACAATAACACAAAAGATGGTTGCACAAGGAATCAAATAAAACCAGAACAATGGTGTACAAGCTGGTGGTATCAATTCACTGTACTATTACAAAGGGGGGTGAGGGAAAGAAGGCATGAAGCATTCAATAGGCTAAGAATATTCCAAGTCATAAGTGTAGCTTTTCTAGCTGGACTCTTGTGGTGGCATACACCAGAATCACACCTTGAAGATAGGACAGCTTTGCTATTTTTCTTTGCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCACAAGAAAGAAGAATGCTAATCAAGGAACGATCATCGGGAATGTACCGTCTTTCATCATACTTTCTAGCAAGAACAATAGGAGACTTGCCACTAGAGCTAGCACTTCCAACAGCATTTGTCATCATATTATATTGGATGGGAGGACTTAAACCTGATCCCGTAACTTTCATCCTTTCACTTCTTGTTGTTCTTTACAGTGTTGTTGTTTCTCAAAGTCTTGGATTAGCATTTGGTGCTATTTTGATGGAGATTAAACAAGCAACTACACTAGCTTCTGTGACAACACTTGTTTTTCTCATTGCTGGAGGATACTATGTACAACAGATTCCACCTTTCATAGTGTGGCTTAAGTACTTAAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGTGTTCAATACAATGAAAATGATTATTATGAATGCTCAAAGGGAGAGTTGTGCAAGATTATGGATTTTCCTCCAATTAAATCAATGGGATTGAATCATATGTGGGTTGATGTGTCCATCATGGCTTTGATGTTGGTTGGTTATAGATTAGTTGCTTATTTTGCACTTCGTAGAGTTAGGTAA 1914 0.3877 MPQNCIAPKPEYFNSTLSLEGSPHITDPPSSNNEQSLPKLIMHPITLKFEDLVYKVKLNQKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLTGKTTYNNQPFSGSIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPKTLTRDEKVVHVERVISELGLNNCRNSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHVTEQSEALEHERKTVRESLIYAYDKNIATRLKAEVSSMEVNNYNNTKDGCTRNQIKPEQWCTSWWYQFTVLLQRGVRERRHEAFNRLRIFQVISVAFLAGLLWWHTPESHLEDRTALLFFFAVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVIILYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKIMDFPPIKSMGLNHMWVDVSIMALMLVGYRLVAYFALRRVR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0832 637 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524
Mal6g0832 637 CDD ABCG_EPDR 44 270 - -
Mal6g0832 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 280 IPR027417 -
Mal6g0832 637 MobiDBLite consensus disorder prediction 17 36 - -
Mal6g0832 637 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 21 635 - -
Mal6g0832 637 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 635 - -
Mal6g0832 637 SMART AAA_5 75 265 IPR003593 -
Mal6g0832 637 Pfam ABC transporter 67 216 IPR003439 GO:0005524
Mal6g0832 637 Gene3D - 46 282 IPR027417 -
Mal6g0832 637 Pfam ABC-2 type transporter 245 329 IPR043926 GO:0140359
Mal6g0832 637 Pfam ABC-2 type transporter 375 581 IPR013525 GO:0016020|GO:0140359
Mal6g0832 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 288 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0832 Mal-Chr6 12530366 12532893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0832 45 264 Calmodulin-binding Proteins AT2G36910 27.679 3.76e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0832 K05681 - gmx:100780191 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0832 6 12530366 12532893 Mal6g0832 6 12530366 12532893 ECH