LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal6g0822	ATGGAACTAAGTATCATGTTATGTTTGTTTACTTCTATTCTCTTCATTGTTCTGTTCAGAATATTCATCAAACCCTTTGTCTCTAAAAGACAAGACTTGCCTCTCCCACCTGGTTCAATGGGTTGGCCTTACATAGGAGAAACTTTTCAACTTTATTCTCAAGACCCAAATGTTTTCTTTGCATCAAAAATTAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTAGGGTGTCCTTGTGTGATGATTTCAAGTCCTGAAGCTGCAAAATTTGTGTTGAATAAAGCTCAACTTTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTTTTTCATCAAGGAGAGTATCATGCTAACTTGAGGAGACTTGTTCTTCGTACTTTCATGCCAGAAGCCATCAGAAATATTGTTCCTGACATTGAATCCATTGCTGAAGATAGTCTTAAATCAATGGAAGGACGCTTAATCACCACTTTCCTTGAAATGAAAACGTTCACATTCAACGTTGCTCTACTTTCAATTTTTGGAAAAGATGAAGTTCACTACAGAGAGCGTTTGAAACAGTGTTACTACACTCTTGAGAAAGGGTACAATTCAATGCCAATTAATCTTCCAGGAACACTCTTCCACAAGGCAATGAAAGCAAGGAAAGAACTTGCGCAGATCTTAGCTGAAATAATCTCAAGTAGGAGAGAGAAGAAACAAGATTACAAAGACTTGTTAGGTTCATTCATGGATGAGAAATCAGGACTAAGTGATGAACAGATAGCAGATAATGTGATTGGAGTAATATTTGCAGCTCGTGATACCACAGCTAGTGTGCTTACGTGGATTGTTAAGTACCTTGGTGAAAATATCAATGTCCTAGAATCAGTGATTGAGGAACAAGAATCTATATTGAAGAGCAAGGAAGAAAATGGTGAAGAAAAGGGTCTTAATTGGGAAGATACAAAGAAAATGGTATTAACTTCAAGAGTTATTCAAGAGACTCTTAGAGTTGCTTCAATTTTGTCTTTCACTTTTAGAGAAGCAGTTGAAGATGTTGAATATCAAGGGTATCTTATACCTAAAGGTTGGAAAGTATTGCCACTGTTTAGGAATATACATCACAGTCCAAACAACTTTAAAGATCCAGAAAAGTTTGATCCTTCAAGATTTGAGGCTGCCACAAAACCCAATACTTTTATGCCATTTGGCAGTGGGATCCATGCTTGTCCTGGCAATGAATTAGCCAAGATGGAGATTTTGGTCCTCTTACATCATCTGACCACAAAGTACAGGTGGTCTGTGGAGGGTACAAAGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGATTGCCCATAACATTATATCCTAAGAAGTAG	1395	0.3756	MELSIMLCLFTSILFIVLFRIFIKPFVSKRQDLPLPPGSMGWPYIGETFQLYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIRNIVPDIESIAEDSLKSMEGRLITTFLEMKTFTFNVALLSIFGKDEVHYRERLKQCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAEIISSRREKKQDYKDLLGSFMDEKSGLSDEQIADNVIGVIFAARDTTASVLTWIVKYLGENINVLESVIEEQESILKSKEENGEEKGLNWEDTKKMVLTSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPNNFKDPEKFDPSRFEAATKPNTFMPFGSGIHACPGNELAKMEILVLLHHLTTKYRWSVEGTKNGIQYGPFALPQNGLPITLYPKK*	465

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal6g0822	464	PRINTS	P450 superfamily signature	403	412	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal6g0822	464	PRINTS	P450 superfamily signature	412	423	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal6g0822	464	PRINTS	P450 superfamily signature	332	343	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal6g0822	464	PRINTS	P450 superfamily signature	273	290	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal6g0822	464	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	405	414	IPR017972	GO:0005506\|GO:0016705
Mal6g0822	464	SUPERFAMILY	Cytochrome P450	30	462	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal6g0822	464	PANTHER	CYTOCHROME P450 26	12	461	-	-
Mal6g0822	464	Coils	Coil	293	313	-	-
Mal6g0822	464	PANTHER	CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE	12	461	-	-
Mal6g0822	464	PRINTS	E-class P450 group I signature	412	435	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal6g0822	Mal-Chr6	12359945	12362422	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal6g0822	4	458	Cytochrome P450	AT4G19230	71.554	0.0	677

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal6g0822	K09843		-	gmx:100170674	842.032

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal6g0822	6	12359945	12362422	Mal6g0822	6	12359945	12362422	ECH

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