Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0807 ATGAAGCCCTTTCTGCACATGTTACAGGCATTTTTGCCTATATACCTTAACATATTACTACTACATAATTTAAACACACTTTGGTTTGGCACAAACACAATTGCTTATGCATCAGGAAGTGATACTGATTATTTAGCATTGCTCAAATTCAGAGAATCAATATCAAGTTACTCAAATGGAGTCTTAGACTCTTGGAATAGTTCTACCCAATTTTGTAAGTGGCATGGAATCACATGCATGAATCAAAGAGTTACAGAGTTGAAACTAGAAGGATATCAGTTGCACGGATCGATATCTCCCTTTGTTGGTAATCTCTCATTTCTGACAAGATTAAATCTCATGAACAACAGCTTCTATGGAACAATCCCACAAGAATTGTGTCATTTAGTACAATTACAACAACTTTACCTCACAAATAACTCATTGGTTGGTCAAATTCCTACAAACTTGTCAAGTTTGTTGGATCTCAAAGACTTATACTTGCAAGGGAACAATCTGGTTGGCAGAATACCAATTGAAATTGGCTCTCTTAGGAAGCTCCAAAATGTAAACATTTGGAACAACAATTTGACAGGAGAAATTCCATCATCTATAGGGAATCTTTCATCTCTTATTTATCTTAATTTGGGTTCCAACAACTTGGAGGGGAATATTCCGCCGGAAATATGTCACTTGAAGAATTTGACAAGAATATCAGTAGGTATAAACAAATTGTCTGGTAAACTTTCACTTTGTCTTTATAATATGTCATCTATTAGACTAATTAGCGTTGACTCCAACAAATTTAATGGCTCTCTTCCACCAAAAATGTTCCACACTCTTCCTAATCTCGGAACACTTTTCATTGGTGGGAATCAAATCTCAGGTCCAATCCCAACTTCCATGTCAAATGCATCTAACCTTCGATCATTTGATATCACTCAAAACCAATTCACGGGTCAAGTTCCAAGTCTTGGGAAGCTAAAAGATTTTCAGCTCATAGGTTTGTCTCACAACAATCTTGGAAGCAACTCAACTAAAGATTTGGAGTTTGTAAAGTCATTGGTTAATTGTAGTAAGTTGTATGTGGTTGATATATCCTACAATAATTTTGGAGGTCCTTTACCAAATTCCTTGGGAAATATGTCCAACAATCTCAACAACCTATATCTTGGGGGCAATCATATATTAGGAAAAATTCCTGGGGAATTAGGAAATCTAGCAAACCTATATCTCTTGACTGTGGAAAATAACCGTTTTGAAGGGATTATTCCAGCTACTTTTGGAAAGTTTCAAAAGTTGCAAGTGTTAGAATTGAGTGGAAACCGGTTGTCAGGAAATATACCAGCCTTTATAGGAAACCTCAGTCAGTTGTTTTATTTGGGTTTAGGACATAATATGTTAGAAGGAAGTATTCCACTAAGCATAGGAAATTGCCAAAAGTTATATCACTTAGACCTATCGCAAAACGAACTTAGAGGAACCATACCCATAGAGGTTTTGAGCCTATTCTCATTAACAAGATTATTGGACTTGTCGGGAAACTCATTGAGTGGTAGTCTACCACAAGAAGTGGGCAGGCTAAAAAATATCGAAATGTTGAATTTCTCTGAGAATCATCTGTCTGGTGATATTCCTAGAACCATTGGGGAATGCGTAAGTTTGGAGTTCCTTTATTTGCAAGGAAATTTCTTCCATGGAGTCATACCAACCTCATTGGCTTCACTGAAAGGTCTTCAACGTTTAGACCTATCACGTAATCGCTTCTCTGGATCAATTCCTATAGGTCTACAAAACATTTCTTTCCTAGAATACTTCAATGTATCTTTTAACATGTTGGAAGGCGAGGTACCAACTGAAGGTGTATTTCAAAATGCAAGTGAGGTGGCAGTAACTGGAAACAATAAACTTTGTGGAGGTATTTCAAAACTGCACCTACCTCCATGCCCTTTAAAAGGAAAGAAACATTCAAAACATCACGATTTCAAGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTTATACTTCTATTTATTCTAACTATCTATTGCATAAGGAAAAGAAGCAAGAAACCTTCTTCTGATTCACCGACAATTGACCTTCTGGCTAAGATTTCATATGAAGACTTGTATAATGGAACCGACGGATTCTCAACAAGAAACTTGATAGGATCTGGAAATTTTGGCTCTGTCTACTTAGGAACTCTCCCATTAGAGGATAAAGTTGTAGCCATAAAGGTTTTGAAACTTCATAAGAAGGGAGCTCACAAGAGTTTTATTGCGGAATGCATTGCACTCAAAAATATTAGACACCGAAATTTGGTAAAGATATTAACAAGTTGTTCCAGTACAGATTTCAAAGGTCAAGAATTTAAAGCTCTTGTTTTTGAGTACATGAACAATGAAAGCTTAGAAAGTTGGTTGCATCCAGCAAAACAAATTGCAGGTCCACAAAAAACATTGAACCTTGCACAAAGGTTAAATATTATTAATGATGTTGCTTCGGCATTTCATTATCTTCACCACGAATGTGAGCAACCTGTCATTCATTGCGATTTAAAGCCTAGCAATGTTCTTCTTGATGATTCTATGGTAGCTCATGTGAGTGACTTTGGCTTGGCAAAATTGCTCCCAAGTATTGGAGTCTCCTTGATGCAAAATAGCACAGTTGGAATAAAGGGGACAATTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTAATTTATCAATCGAAGGCGACATGTATAGCTTTGGAATTCTAGTTTTAGAAATGTTAACTGGAAGGAGACCTACAGATGAAATGTTTGAAGATAGTCATAGTCTCCACAATTTTGTTAAAATTTCAATTTCAAATGACATTTTGCAGATTGTGGATCCAGCCATCATCCACAATGAATTGGAAGGGGCTACTGAAAGTGGTAACCTTGGTGTTTTGCATTCTAATGTAGAGAAATGTTTAATTTCACTTTTTAGTATTGCACTTGGTTGTTCAATGGAATCACCAAAAGAAAGGATGAGTATGGTTCAAGTCATAAGAGAGCTTAATATAATAAAAAGTTTCTTTCCTACTGAAGCTGAATTACAACGACAAAAGTAA 3084 0.3625 MKPFLHMLQAFLPIYLNILLLHNLNTLWFGTNTIAYASGSDTDYLALLKFRESISSYSNGVLDSWNSSTQFCKWHGITCMNQRVTELKLEGYQLHGSISPFVGNLSFLTRLNLMNNSFYGTIPQELCHLVQLQQLYLTNNSLVGQIPTNLSSLLDLKDLYLQGNNLVGRIPIEIGSLRKLQNVNIWNNNLTGEIPSSIGNLSSLIYLNLGSNNLEGNIPPEICHLKNLTRISVGINKLSGKLSLCLYNMSSIRLISVDSNKFNGSLPPKMFHTLPNLGTLFIGGNQISGPIPTSMSNASNLRSFDITQNQFTGQVPSLGKLKDFQLIGLSHNNLGSNSTKDLEFVKSLVNCSKLYVVDISYNNFGGPLPNSLGNMSNNLNNLYLGGNHILGKIPGELGNLANLYLLTVENNRFEGIIPATFGKFQKLQVLELSGNRLSGNIPAFIGNLSQLFYLGLGHNMLEGSIPLSIGNCQKLYHLDLSQNELRGTIPIEVLSLFSLTRLLDLSGNSLSGSLPQEVGRLKNIEMLNFSENHLSGDIPRTIGECVSLEFLYLQGNFFHGVIPTSLASLKGLQRLDLSRNRFSGSIPIGLQNISFLEYFNVSFNMLEGEVPTEGVFQNASEVAVTGNNKLCGGISKLHLPPCPLKGKKHSKHHDFKLIAVIVSVVSFLLILLFILTIYCIRKRSKKPSSDSPTIDLLAKISYEDLYNGTDGFSTRNLIGSGNFGSVYLGTLPLEDKVVAIKVLKLHKKGAHKSFIAECIALKNIRHRNLVKILTSCSSTDFKGQEFKALVFEYMNNESLESWLHPAKQIAGPQKTLNLAQRLNIINDVASAFHYLHHECEQPVIHCDLKPSNVLLDDSMVAHVSDFGLAKLLPSIGVSLMQNSTVGIKGTIGYAPPEYGMGSNLSIEGDMYSFGILVLEMLTGRRPTDEMFEDSHSLHNFVKISISNDILQIVDPAIIHNELEGATESGNLGVLHSNVEKCLISLFSIALGCSMESPKERMSMVQVIRELNIIKSFFPTEAELQRQK* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0807 1027 PANTHER OS04G0122200 PROTEIN 28 1022 - -
Mal6g0807 1027 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Mal6g0807 1027 SMART serkin_6 712 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0807 1027 Pfam Protein kinase domain 714 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0807 1027 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Mal6g0807 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Mal6g0807 1027 SMART LRR_sd22_2 424 450 - -
Mal6g0807 1027 SMART LRR_sd22_2 129 152 - -
Mal6g0807 1027 SMART LRR_sd22_2 569 592 - -
Mal6g0807 1027 SMART LRR_sd22_2 472 493 - -
Mal6g0807 1027 SMART LRR_sd22_2 274 300 - -
Mal6g0807 1027 SMART LRR_sd22_2 153 185 - -
Mal6g0807 1027 SMART LRR_sd22_2 21 42 - -
Mal6g0807 1027 Gene3D Transferase(Phosphotransferase) domain 1 794 1024 - -
Mal6g0807 1027 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Mal6g0807 1027 Pfam Leucine rich repeat 178 238 IPR001611 GO:0005515
Mal6g0807 1027 Gene3D Ribonuclease Inhibitor 340 651 IPR032675 -
Mal6g0807 1027 SUPERFAMILY Protein kinase-like (PK-like) 685 1012 IPR011009 -
Mal6g0807 1027 SUPERFAMILY L domain-like 377 632 - -
Mal6g0807 1027 Gene3D Ribonuclease Inhibitor 270 339 IPR032675 -
Mal6g0807 1027 PANTHER LRR RECEPTOR-LIKE KINASE 28 1022 - -
Mal6g0807 1027 Gene3D Phosphorylase Kinase; domain 1 694 793 - -
Mal6g0807 1027 ProSiteProfiles Protein kinase domain profile. 712 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0807 1027 SUPERFAMILY L domain-like 40 334 - -
Mal6g0807 1027 Gene3D Ribonuclease Inhibitor 43 155 IPR032675 -
Mal6g0807 1027 SMART LRR_typ_2 496 521 IPR003591 -
Mal6g0807 1027 SMART LRR_typ_2 424 448 IPR003591 -
Mal6g0807 1027 SMART LRR_typ_2 569 592 IPR003591 -
Mal6g0807 1027 SMART LRR_typ_2 400 423 IPR003591 -
Mal6g0807 1027 SMART LRR_typ_2 129 153 IPR003591 -
Mal6g0807 1027 SMART LRR_typ_2 201 225 IPR003591 -
Mal6g0807 1027 SMART LRR_typ_2 274 298 IPR003591 -
Mal6g0807 1027 Gene3D Ribonuclease Inhibitor 166 269 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0807 Mal-Chr6 12014392 12017591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0807 41 1025 Receptor kinase-like Gene Family AT3G47570 46.500 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0807 Pkinase 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0807 - - gmx:100792724 1323.15