Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0806 ATGATTGGAAACAATAAGCTTTGTGGAGGTATTTGGGAGTTGCATCTACCACCATGCCCTGTCAAGGGTAGGAAACACACAAAAAATCACAATTCCAAGTTGATAGCGGTGATAGCTAGTGTGGTTTTTTTCCTTCTCATACTTTCATTCATTATAGCTATCTACTGGAGGAGGAAAAGACACCAAAAACGAAACATTGATTCACCAACAATTGATAAACTAGCTAAGGTTTCATACCAAGGCTTACACCGAGGAACCGATGGGTTCTCCGATAGAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTGTATAGAGGAAATCTTGAATCAGAAGATAATGTTGTTGCAGTAAAGGTCTTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGGTTTTAACATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGTTTAGAACAATGGTTGCATCCTGAGATTTTAAGTGCAGATCCTCCAACAACATTGGATCTTGGTCATAGATTAAACATCATTATCGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCGTCTCAGCCATTTGTGGTACCACTCATAAGAATACTAGTACAGCTTCAGTAAAAGGAACAGTTGGCTATGCTCCTCCGGAGTATGGAATGTGTTCTGAAGTATCCACATGTGGTGACATGTATAGCTTTGGAATCCTTGTGTTGGAAATGCTTACTGGTAGAAGACCCACTAATGAAGCTTTTAAAGATGATCAAAATCTACATAACTTTGTTACAATATCATTTCCTGGTAATCTTACGAAGATTTTGGACCCACGTCTTGTATCAAGAGACGCAAAAGGAGAAATGGAAGATGGAAATCATGAGAATCTTATTCCAACTGCAAAAGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATTTGTTCAATGGAGTCATCAAAAGAAAGAATGAATATTGGGGATGTCACTAGAGAGCTTAGTATTATCAGAAAGGCTTTTCTTGCTGGTGAGATAAACTGA 1206 0.3756 MIGNNKLCGGIWELHLPPCPVKGRKHTKNHNSKLIAVIASVVFFLLILSFIIAIYWRRKRHQKRNIDSPTIDKLAKVSYQGLHRGTDGFSDRNLIGSGSFGSVYRGNLESEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKVLTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILSADPPTTLDLGHRLNIIIDVASALHYLHRECEQLVLHCDLKPSNVLLDDDMVAHVSDFGIARLVSAICGTTHKNTSTASVKGTVGYAPPEYGMCSEVSTCGDMYSFGILVLEMLTGRRPTNEAFKDDQNLHNFVTISFPGNLTKILDPRLVSRDAKGEMEDGNHENLIPTAKECLVSLFRIGLICSMESSKERMNIGDVTRELSIIRKAFLAGEIN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0806 401 Gene3D Phosphorylase Kinase; domain 1 51 170 - -
Mal6g0806 401 Gene3D Transferase(Phosphotransferase) domain 1 171 397 - -
Mal6g0806 401 SUPERFAMILY Protein kinase-like (PK-like) 67 388 IPR011009 -
Mal6g0806 401 ProSiteProfiles Protein kinase domain profile. 89 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0806 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Mal6g0806 401 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Mal6g0806 401 SMART serkin_6 89 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0806 401 PANTHER OS04G0122200 PROTEIN 2 397 - -
Mal6g0806 401 Pfam Protein kinase domain 91 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0806 401 PANTHER LRR RECEPTOR-LIKE KINASE 2 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0806 Mal-Chr6 12011262 12012580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0806 1 396 Receptor kinase-like Gene Family AT3G47570 46.341 3.00e-115 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0806 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0806 - - mtr:MTR_5g025930 635.565