Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0804 ATGTTTCCCAAATTTGCACTTTTGTTATATTTTCTCTTTGCTTTCAAATTTGGCCCAAAAACAATAGTCTCTACACTAGGAAACCAGACTGACCATTTGGCATTGCTCAAATTCAAAGAATCTATATCCAGTGACCAACATAAAATCCTTGATTCTTGGAATGGTTCTATCCATTTTTGCAACTGGCATGGAATCACATGCAACCCTATGCATCAAAGAGTTACAAAGTTGAAGTTACAAGGATACAAGTTGCATGGAACCTTATCTTCTCATGTTGCTAATCTCTCTTTTCTGATAAACCTCAGCCTTGAAGACAACAAATTCTCTGGAAAAATTCCACAAGAGTTGGGTCAGTTGTTACAACTACAAGAACTCTATCTCAGCAATAACTCGTTTACCGGAGAAATTCCTACAAACTTGACAAATTGTGTCAACCTTAAATACTTAAACTTGAGAGGGAACAATTTGATTGGCAAAATACCAATTGAAATTGGCTCTCTTCAAAATCTTCAAAAGTTGAGTGTTAGGGGAAACAATTTGATCGGAAGAGTCACACCATTCATAGGGAATCTTTCATTCTTAAAAATCCTCTCAGTTTCTGATAACAAATTAGAGGGAGATATTCCACAAGAAATATGCCGTCTCAAAAAATTGACAGAGGTAGCAGTGGGGCTTAACAAACTATCTGGTACATTTCCTTCTTGTCTTTTTAATCTTTCATCTCTTACTTTTTTCTTAACTCCAAAGAATGAGTTTAATGGCTCTCTTCTAGCCAACGTGTTCAGTACCCTCCCTAATCTCCAAGTGTTTGGAATTGGTGACAATAAAATCTCGGGTCTAATGCCCACTTCTGTTACAAATGCTTCTACACTGAGAACACTTGATATGAGCGTAAACTATTTTGTCGGAAAAGTACCGAGTCTTGGGAGGCTACATTATCTTAGTAGGCTAAATTTGGAAACAAATAATTTTGGAGACAATTCAACTAAGGATTTGAGGTTTTTTAAGTCATTGACAAATTGTAGTAAGTTGCAAGTGGTTTCTATATCCCATAATAATTTTGGAGGTAGTTTGCCAAATACAATAGGCAATTTATCCACTCAACTTAGCCAACTATATCTTGGTAGTAATAAAATATCTGGGCAAATTCCTTTAGATTTAGGAAATCTAAATAGTTTAATTCTCTTGACCATGGAAAACAACCGTTTTGAAGGGATGATTCCAAATTCTTTTGGGAAGCTTCAAAAGATTCAAATGTTAGATTTGAGCAAAAACATGTTGTTAGGAAGTATACCATCCTTCATAGGCAACCTTAGTCAGATGTATTATTTGAGTTTAGCTCGTAATATGTTAGGACAGAATATTCCACCAAGCTTAGGAAATTGTCAAAAATTACGTCACATAAATCTTTCACGAAATAATCTTAGAGGAAACATACCTTCAGAAGTTTTAAGTCTATCCTCTTTATCAAACTCACTGGACTTGTCACAAAACTCATTGAGTGGAAACCTACCTATTGAAGTTGGTAGTCTAATAAATATTAATAAGCTAGATGTCTCTGAGAATGATTTGTCTGGTGAAATTCCTATTACCATTGGTCAATGCAAAAGAATAGAGTACCTTTATTTGCAAGGGAACTCCTTTCACGGAATCATACCATCCTCCTTGGCTTCACTTAGAGGTCTTCAATATTTAGACCTGTCAAGAAATCGGTTGTTTGGATCAATTCCTAATGTTCTGCAGAATATTTCTCATTTAGAACACTTGAACGTTTCATTTAACATTTTGGATGGAGAGGTTCCAAAAGAAGGTGTCTTTGGAAATGCTAGCAGGTTAGCGGTGTTCGGGAACAGTAAGCTTTGTGGAGTGATAGTTAGTGTGGTTGCTTTTCTTATCATAATGCTACTTATTCTAGCTATCTATTACTTGATGAAGAAAAGAAACAAGAAACCATCTTCAGATTCACCAATAATTGACCAACTAGCTATGGTTTCTTACCAAGACTTATATCAGGCAACTGATGGCTTCTCATCTAGAAACTTGATTGGATCAGGAGGATTTGGTTCGGTGTATAAAGGAAATCTTATTTCAGAAGATAAAGTTATCGCTGTGAAGGTCCTGGACCTTGAAAAGAAGGGAGCTTACAAGAGTTTTATTACCGAATGTAATGCACTCAAAAATATTAGACATCGAAATCTGGTTAAGATTTTGACATGTTGTTCTAGTATTGATTACAAAGGTCAAGAATTCAAAGCTCTAGTTTTTGACTACATGAAAAATGGAAGCTTAGAAAACTGGTTGCATCCAAGGACAGAGGATGTAGAGCAACCAAGAACATTGGATCTTGATCAAAGATTGAATATCATTATTGATGTTGCTTATGCATTACATTATCTTCATCATGAATGCGACCAATTGGTCCTGCATTGTGATCTAAAGCCAAGCAATGTCCTTATTGATGAAGACAATGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCGTCTCGTCTGTGGACGGTATATCTCCTAAGGAAACTAGCACAATTGGAATAAAAGGGACCGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTTTCCACACATGGTGACATGTATAGCTTTGGGATGCTTATATTGGAAATGATTACTGGAAGAAGACCAACAGATGAAATGTTTATAGATGGTCAAAATCTGCATTTGTATGTTGAAAATTCATTTCCTAATAATGTTATGCAGATTTTGGACACACATATTATACCAAGAGATGAAGAAGCAGCAATTGAAGACGGAAGCAGTAGAAATCTTATTTCATTAATACATATATCCTTAGTTTCACTGTTTAGGATTGGGCTTGCTTGTTCGAATGAATCGCCAAAAGAAAGAATGAATATAGTGGATGTCACTAGAGAACTAAACATAATCAGAAAGGTTTTTCTCAGTGGTGTTCACCCTCGTGAGTAA 2973 0.3586 MFPKFALLLYFLFAFKFGPKTIVSTLGNQTDHLALLKFKESISSDQHKILDSWNGSIHFCNWHGITCNPMHQRVTKLKLQGYKLHGTLSSHVANLSFLINLSLEDNKFSGKIPQELGQLLQLQELYLSNNSFTGEIPTNLTNCVNLKYLNLRGNNLIGKIPIEIGSLQNLQKLSVRGNNLIGRVTPFIGNLSFLKILSVSDNKLEGDIPQEICRLKKLTEVAVGLNKLSGTFPSCLFNLSSLTFFLTPKNEFNGSLLANVFSTLPNLQVFGIGDNKISGLMPTSVTNASTLRTLDMSVNYFVGKVPSLGRLHYLSRLNLETNNFGDNSTKDLRFFKSLTNCSKLQVVSISHNNFGGSLPNTIGNLSTQLSQLYLGSNKISGQIPLDLGNLNSLILLTMENNRFEGMIPNSFGKLQKIQMLDLSKNMLLGSIPSFIGNLSQMYYLSLARNMLGQNIPPSLGNCQKLRHINLSRNNLRGNIPSEVLSLSSLSNSLDLSQNSLSGNLPIEVGSLININKLDVSENDLSGEIPITIGQCKRIEYLYLQGNSFHGIIPSSLASLRGLQYLDLSRNRLFGSIPNVLQNISHLEHLNVSFNILDGEVPKEGVFGNASRLAVFGNSKLCGVIVSVVAFLIIMLLILAIYYLMKKRNKKPSSDSPIIDQLAMVSYQDLYQATDGFSSRNLIGSGGFGSVYKGNLISEDKVIAVKVLDLEKKGAYKSFITECNALKNIRHRNLVKILTCCSSIDYKGQEFKALVFDYMKNGSLENWLHPRTEDVEQPRTLDLDQRLNIIIDVAYALHYLHHECDQLVLHCDLKPSNVLIDEDNVAHVSDFGIARLVSSVDGISPKETSTIGIKGTVGYAPPEYGMGSEVSTHGDMYSFGMLILEMITGRRPTDEMFIDGQNLHLYVENSFPNNVMQILDTHIIPRDEEAAIEDGSSRNLISLIHISLVSLFRIGLACSNESPKERMNIVDVTRELNIIRKVFLSGVHPRE* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0804 990 SMART LRR_sd22_2 414 440 - -
Mal6g0804 990 SMART LRR_sd22_2 167 193 - -
Mal6g0804 990 SMART LRR_sd22_2 559 585 - -
Mal6g0804 990 SMART LRR_sd22_2 366 387 - -
Mal6g0804 990 SMART LRR_sd22_2 119 142 - -
Mal6g0804 990 PANTHER OS04G0122200 PROTEIN 622 984 - -
Mal6g0804 990 SUPERFAMILY L domain-like 29 324 - -
Mal6g0804 990 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mal6g0804 990 ProSiteProfiles Protein kinase domain profile. 676 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0804 990 Gene3D Ribonuclease Inhibitor 333 629 IPR032675 -
Mal6g0804 990 Pfam Protein kinase domain 678 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0804 990 Gene3D Phosphorylase Kinase; domain 1 639 757 - -
Mal6g0804 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Mal6g0804 990 PANTHER OS04G0122200 PROTEIN 18 623 - -
Mal6g0804 990 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Mal6g0804 990 Pfam Leucine rich repeat 537 594 IPR001611 GO:0005515
Mal6g0804 990 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Mal6g0804 990 PANTHER LRR RECEPTOR-LIKE KINASE 622 984 - -
Mal6g0804 990 PANTHER LRR RECEPTOR-LIKE KINASE 18 623 - -
Mal6g0804 990 SUPERFAMILY Protein kinase-like (PK-like) 649 975 IPR011009 -
Mal6g0804 990 SMART serkin_6 676 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0804 990 SMART LRR_typ_2 191 215 IPR003591 -
Mal6g0804 990 SMART LRR_typ_2 486 511 IPR003591 -
Mal6g0804 990 SMART LRR_typ_2 559 582 IPR003591 -
Mal6g0804 990 SMART LRR_typ_2 119 143 IPR003591 -
Mal6g0804 990 SMART LRR_typ_2 264 287 IPR003591 -
Mal6g0804 990 SMART LRR_typ_2 438 462 IPR003591 -
Mal6g0804 990 SMART LRR_typ_2 390 413 IPR003591 -
Mal6g0804 990 Gene3D Transferase(Phosphotransferase) domain 1 758 983 - -
Mal6g0804 990 SUPERFAMILY L domain-like 367 622 - -
Mal6g0804 990 Gene3D Ribonuclease Inhibitor 24 88 IPR032675 -
Mal6g0804 990 Gene3D Ribonuclease Inhibitor 89 326 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0804 Mal-Chr6 11984620 11987925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0804 28 983 Receptor kinase-like Gene Family AT3G47570 43.574 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0804 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0804 - - gmx:100801459 1206.43