Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0803 ATGAAGTCTTTTTCTTTGTTGTCAATGTCGCCTACACTTTTATACCTTGATTTGCTTTTTCTGTTTACCTTAAGTTTAATGTGGTTCGGTACAAACAAAATTATGGCAGGGGCTGCATTAGCAAACCAAACAGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCATATAAAGCTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGAATGGAATCGCATGCAGCCCCATGCATCAAAGAGTTATAGGATTGAACTTGAAAGGATATCAGCTACATGGATCTTTATCTCCACATGTTGGCAATCTTACTTTTCTGAAAACTCTCGACCTTGGAAACAACAGCTTCTTGGGAGAAATTCCACAGGAGTTGGGTCAGTTGCTACAATTGCAACACCTTTCCCTCAGCAATAACTCGTTTGCGGGTGAAATTCCTACAAACCTGACATTTTGCTCCAATCTCAAAGACTTGTTCTTGGATGGGAACAAACTCATTGGTAAAATACCAATTGAAATCGGCTCTTTGAAAAAGCTTCAAAAAATGACCGTTCGGAAAAACAATTTAACCGGAGGAATCCCTTCATTCATAGGGAATCTTTCTTGTTTAACAGGTGTTGATTTTGGTCGTAACAGTTTTGAGGGAGATATTCCACAAGAATTATGCCGCCTCAAAAACTTGACAGTTTTAATTGTGGATGAGAACAATTTGTCCGGTAAGATTCCTTCATGTCTGTATAATATCTCATCACTTATTAAACTCGGAGTAACACTGAATAACTTTCATGGATCTTTTCCACCCAACATGTTCCACACCCTCCCCAATCTAAAATTCTTTTATTTTGGAGGAAATCAATTCTCAGGTCCAATCCCTATTTCGATTGCAAATGCTTCTGCCCTACGAATGCTAATCTTAGGAAACAATAATTTAGTTGGACAAGTTCCAAGTCTAGGGAAGTTACAAGATCTTTCCTTTCTAGTTTTGGAAAACAACAATTTAGGTAACAATTCAAGTATGGATTTAGAGTTTCTAAAATCCTTGACAAACTGTAGTAAACTACAAGTCATTACTATAGCCTATAATAATTTTGGTGGTCATTTGCCAAATTCCATAGGCAATTTTTCCACTGAACTTACAAATCTATATCTTGGGGGTAATCAAATATCAGGAAAGATTCCAGTAGAATTAGGACGTCTAGTTGGTTTAATTGTCTTGACCATGGAGGCTAACTACTTTGAAGGAATTATTCCAACTACTTTTGGGAAGTTCCAAAAGATGCAACTATTATATTTGCATAGAAACAAGTTGTCAGGATATATGCCACCCTTTATAGGCAATCTCAGTAAATTGTTTGATTTAGAATTAGATCATAATATGTTTCAAGGAAATATTCCTCCAAGCATAGGAAACTGTCAAAATTTACAATATCTAGATCTTTCTCATAATAAGTTTAGAGGAACCATACCTGTAGAGGTTTTTAATCTTATTTCTTTATCAAACTTATTGAACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGAGTATGCTAAAAAATATTGATGTGTTAGATGTCTCTGAGAATCATCTATCTGGTAATATTCCTAGAGAAATTGGTGAATGCATAAGCTTAGAATACCTTCTTTTGAAAGGGAACTCCTTCAATGGAACAATACCGTCCTCTTTGGCTTCTCTAAAAGGTCTTCGCTATTTAGACCTTTCAATAAACCAATTGTCTGGATCAATTCCTGATGTTTTGCAGAATATCTCTGGCTTAGAATACTTGAATGTTTCTTTTAACATGCTGGAAGGTGAGGTTCCAACAGAAGGTGTCTTTGGAAATACAACCCAAGTAGAAATGATTGGAAACAAAAAGCTTTGTGGAGGTATTTCCCGGCTGCATCTACCACCATGCCCTATCAAGGGTAGGAAACATGCAAAACAATACAAGTTCAGGTTGATAGCAGTGATAGTTAGCGTGGTTTCTTTTCTTCTCATACTTTCATTTATCATAACTATCTACTGGATGAGGAAAAGAAATCAAAAGCGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCAAGAATTACACAAAGGAACAGATGGGTTCTCAGATAGTAACATGATCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGTGTCAGAAGATAATGTTGTTGCAGTAAAGGTCTTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGGTTTTAACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTGGTGTTTGATTACATGAAAAATGGTAGCTTAGAACAATGGTTGCATCCTGAGAATTTAAATGCAGAGCCTCTAACAACATTGGACCTTGGTCATAGATTAAACATCATTATCGATGTTGCTTCTGCATTACATTATCTTCATCAAGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTCATATCAGCCATTGACGGTACTTCTCATAAGAATACTAGTACAATTGGAATAAAAGGAACCATTGGCTATGCTCCTCCAGAATATGGAATGGGTTCTGAAATGTCTACATGCGGCGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACTGCTAGAAGACCCACTGATGAAGCTTTTGAAGATGGTCAAAATCTGCATAATTTTGTTGCAATTTCATTTCCTGATAATCTTATAAATATTTTGGACCAACATCTTGAATATGGGAATCGTGAGAATCTTACTCCATTTGTTGAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATTTGTTCAATGGAATCACCGAATGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTAGCACAATCCGAAAGGCCTTTCTCGCCGGTTTTCGCACTCACAACTAA 3066 0.364 MKSFSLLSMSPTLLYLDLLFLFTLSLMWFGTNKIMAGAALANQTDHLALLKFKESISSDPYKALESWNSSIHFCKWNGIACSPMHQRVIGLNLKGYQLHGSLSPHVGNLTFLKTLDLGNNSFLGEIPQELGQLLQLQHLSLSNNSFAGEIPTNLTFCSNLKDLFLDGNKLIGKIPIEIGSLKKLQKMTVRKNNLTGGIPSFIGNLSCLTGVDFGRNSFEGDIPQELCRLKNLTVLIVDENNLSGKIPSCLYNISSLIKLGVTLNNFHGSFPPNMFHTLPNLKFFYFGGNQFSGPIPISIANASALRMLILGNNNLVGQVPSLGKLQDLSFLVLENNNLGNNSSMDLEFLKSLTNCSKLQVITIAYNNFGGHLPNSIGNFSTELTNLYLGGNQISGKIPVELGRLVGLIVLTMEANYFEGIIPTTFGKFQKMQLLYLHRNKLSGYMPPFIGNLSKLFDLELDHNMFQGNIPPSIGNCQNLQYLDLSHNKFRGTIPVEVFNLISLSNLLNLSHNSLSGSLPREVSMLKNIDVLDVSENHLSGNIPREIGECISLEYLLLKGNSFNGTIPSSLASLKGLRYLDLSINQLSGSIPDVLQNISGLEYLNVSFNMLEGEVPTEGVFGNTTQVEMIGNKKLCGGISRLHLPPCPIKGRKHAKQYKFRLIAVIVSVVSFLLILSFIITIYWMRKRNQKRSFDSPTIDQLAKISYQELHKGTDGFSDSNMIGSGSFGSVYKGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKVLTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPENLNAEPLTTLDLGHRLNIIIDVASALHYLHQECEQLVIHCDLKPSNVLLDDDMVAHVSDFGIARLISAIDGTSHKNTSTIGIKGTIGYAPPEYGMGSEMSTCGDMYSFGILMLEMLTARRPTDEAFEDGQNLHNFVAISFPDNLINILDQHLEYGNRENLTPFVEECLVSLFRIGLICSMESPNERMNIVDVTRELSTIRKAFLAGFRTHN* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0803 1021 PANTHER OS04G0122200 PROTEIN 31 1015 - -
Mal6g0803 1021 Gene3D Ribonuclease Inhibitor 42 199 IPR032675 -
Mal6g0803 1021 SMART LRR_typ_2 404 427 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 597 622 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 525 549 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 477 500 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 109 133 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 573 596 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 229 253 IPR003591 -
Mal6g0803 1021 SMART LRR_typ_2 452 476 IPR003591 -
Mal6g0803 1021 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Mal6g0803 1021 SUPERFAMILY L domain-like 42 338 - -
Mal6g0803 1021 Gene3D Phosphorylase Kinase; domain 1 678 797 - -
Mal6g0803 1021 SUPERFAMILY Protein kinase-like (PK-like) 691 1006 IPR011009 -
Mal6g0803 1021 Gene3D Ribonuclease Inhibitor 342 647 IPR032675 -
Mal6g0803 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Mal6g0803 1021 SUPERFAMILY L domain-like 382 636 - -
Mal6g0803 1021 ProSiteProfiles Protein kinase domain profile. 716 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0803 1021 SMART serkin_6 716 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0803 1021 Gene3D Transferase(Phosphotransferase) domain 1 798 1015 - -
Mal6g0803 1021 Pfam Leucine Rich Repeat 112 131 IPR001611 GO:0005515
Mal6g0803 1021 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Mal6g0803 1021 PANTHER LRR RECEPTOR-LIKE KINASE 31 1015 - -
Mal6g0803 1021 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Mal6g0803 1021 Gene3D Ribonuclease Inhibitor 200 341 IPR032675 -
Mal6g0803 1021 Pfam Protein kinase domain 717 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0803 Mal-Chr6 11933930 11937272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0803 39 1019 Receptor kinase-like Gene Family AT3G47570 46.371 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0803 Pkinase 6.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0803 - - mtr:MTR_6g036870 1400.96