Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0800 ATGAAGCCTTTTTCTTTCTTGTGCGGATACTTTCATTTTTTTTTTCTGTTTACCTTAAATTTAATGTGGTTTGGTCCTAACAAAATTGTGGCAGTGGCAACATTTGGAAACCAAAGAGATCATTTGTCATTGCTCAAATTCAAAGAATCAATATCTAGTGATCCATATAAAGCTCTTGAATCTTGGAATTCTTCCATCAACTTCTGCAAGTGGCATGGAATCACATGCAGCCCCATGCATCAAAGAGTTATAGGATTGAACTTGAAAGGATATCATTTACATGGATCTTTATCTCCACATGTTGGTAATCTCACTTTTCTGATAAATCTCAATCTTGGAAACAATAGCTTCTTTGGAGAAATCCCACAAGAGTTGGGTCAGTTGCTACAACTGCAACAACTTTATCTCACCAATAACTCATTTGTAGGAGAAATTCCTACAAACTTGACATTTTGCTCCAATCTCAAAGACTTGTTCTTGGATGGGAACAAACTCATTGGTAAAATACCAATTAAAATCGACTCTTTCAAAAAACTTCAATTAATGAATGTTAAGGGAAACAATTTAACTGGAGGAATTCCTACATTCATAGGAAATCTTTCATGCTTAACACTTGTTTCAGTGGCTGGTAACAATTTTGAGGGAGATATTCCACAAGAAATATGTCGCCTAAAAAACTTGACAATATTTGCTGTGGATGTGAACAAGTTGTCCGGTAAGATTCCTTCTTGTCTTTATAATATCTCGTCACTTATTGTCCTTGCAGTAACACAAAATAGCTTTCATGGATCTTTTCCACCCAACATGTTCCACACCCTCCCCAATCTTCAAATATTTGATTTTGGAGCAAATCAATTCTCAGGTCCATTCCCTATTTCGATTGCAAATGCTTCTGGCCTCCAAAGACTAGACTTAGGAAACAACAATAATTTGGTTGGACAAGTTCCAAGTCTAGGGAAGTTACAAGATCTTTACTTGCTAAATTTGCAAACCAACGATTTAGGTAACAATTCAAGTAAGGATTTAGAGTTTCTAAAATCCTTGACAAACTGTAGTAAACTACGAGCAATTTCTATAACCAATAATAATTTTGGAGGTCATTTGCCAAATTCCATAGGCAATTTATCCACTGAACTTAAACAACTATATCTTGGGGGTAATCATATATTAGGAAAAATTCCTGCAGAATTAGGACGCCTAGTTGGTTTAATTCTCTTGACCATGGAATCTAACTACTTTGAAGGAAATATTCCAACTACTTTTGGGAAATTCCAAAAGATGCAAATGTTAGATTTGGCTGACAACAAGTTGTCAGGATATATGCCACCCTTTATAGGAAATCTCAGTCAATTGTTTTATTTAGGGTTAGAATATAATATGTTTCAAGGAAATATTCCTCCAAGCATAGGAAATTGTCAAAATTTACAGTATCTAGATCTTTCTCACAATAAGTTCAGAGGAACCATACCTGTAGAGGTTTTTAATCTTTTTTCTTTATCAAACTTATTGAACTTGTCACATAACTCTTTGAGTGGTGGCTTACCAAGAGAAGTGGGTATGTTAAAAAATATTGAAAGATTAGATGTCTCTGAGAATCATCTATCTGGTGATATTCCTAGAGAAATTGGTGAATGTATAACCTTAGAATATGTTTTTTTGCAAAGGAACTCCTTCAACGGAACAATACCGTCATCTTTGGCTTCTCTCAAAGGTCTTCAATATTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGTTATGCAAAATATTTATGTTTTAGAATATTTGGATGTTTCTTTTAACCTGTTGGAAGGAGAGGTACCAACAACTGGTGTATTTGGAAATGTAACACAAATAGAAGTGATTGGAAACAAAAAGCTTTGTGGAGGTATTTCTCAGCTGCATCTACCACCATGCCTTATCAAGGGTAGGAAACATGCAAAACATCACAAGCTCAGGTTAATAATAGTGATAGTTAGTGTGGTTTCTTTTATTCTCATACTTTCATTTGTTATAACTATCTACTTGATGAGGAAAAGAAATCTAAAGAGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGAATTACATCTAGGAACCGATGGGTTCTCGGATAGAAACATAATCGGAATAGGATGTTTTGGTTCTGTGTACAGAGGAAACCTTGTGTCAGAAGATAATGTTGTTGCAGTAAAGGTCTTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACATCGAAATTTAGTTAAGGTTTTATCATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTGGTATTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGAATTTAAATGCAAGGCCTCCAACTACATTGGACCTTGGTCATAGGTTAAACATTATTAACGATGTCGCTTCTGCATTGCATTATCTTCATCGAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCGTCTCAACCATTGACGGTACTTCTCATAAGAATACTAGTACAATTGGAATAAAAGGAACCATTGGCTATGCTCCTCCAGAATATGGATTGGGTTCTGAAATGTCTACATGTGGTGACATGTATAGCTTTGGAATCATTATGTTGGAAATGCTTACCGGTAGAAGGCCCACTGATGAAATTTTTGAAGATGGTCAAAATCTGCATAATTTTGTTGCAATTGCATTTCCTGATAATCTTATAAATATTTTGGACCCACATCTTGTATCAAGAGGTGCGAAAATAGCAATAGACGATGGGAATTGTGAGAATCTTACTCCATTTGTTGAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATTTGTTCAATGGAATCACCGAATGAAAGAATGAATATTGCGGATGTCACTAGAGAGCTTAGCTCAATCCGAAAGGCCTTTCTTGCTGGTGAGATAAACTGA 3075 0.3535 MKPFSFLCGYFHFFFLFTLNLMWFGPNKIVAVATFGNQRDHLSLLKFKESISSDPYKALESWNSSINFCKWHGITCSPMHQRVIGLNLKGYHLHGSLSPHVGNLTFLINLNLGNNSFFGEIPQELGQLLQLQQLYLTNNSFVGEIPTNLTFCSNLKDLFLDGNKLIGKIPIKIDSFKKLQLMNVKGNNLTGGIPTFIGNLSCLTLVSVAGNNFEGDIPQEICRLKNLTIFAVDVNKLSGKIPSCLYNISSLIVLAVTQNSFHGSFPPNMFHTLPNLQIFDFGANQFSGPFPISIANASGLQRLDLGNNNNLVGQVPSLGKLQDLYLLNLQTNDLGNNSSKDLEFLKSLTNCSKLRAISITNNNFGGHLPNSIGNLSTELKQLYLGGNHILGKIPAELGRLVGLILLTMESNYFEGNIPTTFGKFQKMQMLDLADNKLSGYMPPFIGNLSQLFYLGLEYNMFQGNIPPSIGNCQNLQYLDLSHNKFRGTIPVEVFNLFSLSNLLNLSHNSLSGGLPREVGMLKNIERLDVSENHLSGDIPREIGECITLEYVFLQRNSFNGTIPSSLASLKGLQYLDLSRNQLSGSIPDVMQNIYVLEYLDVSFNLLEGEVPTTGVFGNVTQIEVIGNKKLCGGISQLHLPPCLIKGRKHAKHHKLRLIIVIVSVVSFILILSFVITIYLMRKRNLKRSFDSPTIDQLAKVSYQELHLGTDGFSDRNIIGIGCFGSVYRGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKVLSCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPENLNARPPTTLDLGHRLNIINDVASALHYLHRECEQLVLHCDLKPSNVLLDDDMVAHVSDFGIARLVSTIDGTSHKNTSTIGIKGTIGYAPPEYGLGSEMSTCGDMYSFGIIMLEMLTGRRPTDEIFEDGQNLHNFVAIAFPDNLINILDPHLVSRGAKIAIDDGNCENLTPFVEECLVSLFRIGLICSMESPNERMNIADVTRELSSIRKAFLAGEIN* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0800 1024 Gene3D Ribonuclease Inhibitor 40 153 IPR032675 -
Mal6g0800 1024 Gene3D Transferase(Phosphotransferase) domain 1 794 1020 - -
Mal6g0800 1024 Pfam Protein kinase domain 714 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0800 1024 SUPERFAMILY Protein kinase-like (PK-like) 688 1011 IPR011009 -
Mal6g0800 1024 ProSiteProfiles Protein kinase domain profile. 712 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0800 1024 SMART serkin_6 712 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0800 1024 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Mal6g0800 1024 SMART LRR_typ_2 569 592 IPR003591 -
Mal6g0800 1024 SMART LRR_typ_2 521 545 IPR003591 -
Mal6g0800 1024 SMART LRR_typ_2 104 128 IPR003591 -
Mal6g0800 1024 SMART LRR_typ_2 472 496 IPR003591 -
Mal6g0800 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Mal6g0800 1024 PANTHER LRR RECEPTOR-LIKE KINASE 25 1019 - -
Mal6g0800 1024 Gene3D Ribonuclease Inhibitor 270 340 IPR032675 -
Mal6g0800 1024 Gene3D Ribonuclease Inhibitor 167 269 IPR032675 -
Mal6g0800 1024 SUPERFAMILY L domain-like 39 334 - -
Mal6g0800 1024 Gene3D Ribonuclease Inhibitor 341 642 IPR032675 -
Mal6g0800 1024 Gene3D Phosphorylase Kinase; domain 1 693 793 - -
Mal6g0800 1024 PANTHER OS04G0122200 PROTEIN 25 1019 - -
Mal6g0800 1024 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Mal6g0800 1024 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Mal6g0800 1024 SUPERFAMILY L domain-like 379 632 - -
Mal6g0800 1024 PRINTS Leucine-rich repeat signature 475 488 - -
Mal6g0800 1024 PRINTS Leucine-rich repeat signature 569 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0800 Mal-Chr6 11909540 11912705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0800 35 1018 Receptor kinase-like Gene Family AT3G47570 45.126 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0800 Pkinase 8.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0800 - - mtr:MTR_6g036870 1403.65