Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0785 ATGTCATTGGTTCGCAACCGACTATCTGGTACATTTCCTTCTTGCCTTTATAATATGTCATCACTTACTATTATCTCAGTTGCACTCAATGATTTTAATGGCTCTTTTCCACCAAATATGTTCAACACCCTTTCCAATCTTCAATATTTTGCAATTGGAGGAAATCAATTCTCAGGTCCAATCCCTATTTCCATTGCAAATGCTTCAGCTCTACAAACACTAGACTTAGGTCATCAAAGCAATTTGGTAGGAAAAGTTCCAAATCTAGGGAAGTTAGTTGATCTTCAATGGCTAAGTCTGGAATTCAACAATTTAGGTGACAATTCAACTAAGGATTTGGAGTTCTTAAAGTCCTTGACAAATTGTAGTAACCTACAAGTGATTTCTATATCCGGTAATAATTTTGGAGGTAATTTGCCAAATTTGGTAGGCAATTTATCCACTCAACTTAGTCTACTCTATGTTGGGGGTAATCAGATATCAGGAAAGATTCCTGCAGAACTAAGCAATCTAATTGGCTTAACTCTCTTGAGCATGGAACTTAACCACTTTGAAGGAATTATTCCAGCTACTTTTGGGAACTTTGAGAAAATGCAAAAGTTAGAATTGAATGGAAATAAGTTGTCGGGAGAGTTGAATGTTTCTTTCAACCTGTTGGAAGGAGAGGTACCAACAAAACGTGTCTTTGGAAATGTAAGTGAGTTAGCCGTGACTGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGCTTCATCTACAGCCATGTCCTGTCAAAGGAAAAGAAACAAGAAACAAAATTCTGATTCACCAACCAACAATTGACCCACTTGGTAAAGTTTCATATCAAGACCTTCACCAAGGAACTGATGGGTTTTCTACTATTGACATGGCTTCTGTATTACATTACCTTCATAATGAATGTGAGCAATCGATCATTCATTGTGATCTAAAGCCAAGCAATGTCTTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGAAGAAGGAAACAGTGGAAATTTCACTCCAAGTGTAGAGTTAAGCATAATTAAAAAGGCCTTTCTTTCCGGTGAGATTGATTGA 1086 0.3702 MSLVRNRLSGTFPSCLYNMSSLTIISVALNDFNGSFPPNMFNTLSNLQYFAIGGNQFSGPIPISIANASALQTLDLGHQSNLVGKVPNLGKLVDLQWLSLEFNNLGDNSTKDLEFLKSLTNCSNLQVISISGNNFGGNLPNLVGNLSTQLSLLYVGGNQISGKIPAELSNLIGLTLLSMELNHFEGIIPATFGNFEKMQKLELNGNKLSGELNVSFNLLEGEVPTKRVFGNVSELAVTGNNKLCGGISELHLQPCPVKGKETRNKILIHQPTIDPLGKVSYQDLHQGTDGFSTIDMASVLHYLHNECEQSIIHCDLKPSNVFLDDDMVAHVSDFEEGNSGNFTPSVELSIIKKAFLSGEID* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0785 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Mal6g0785 361 PANTHER OS04G0122200 PROTEIN 212 263 - -
Mal6g0785 361 SUPERFAMILY L domain-like 3 245 - -
Mal6g0785 361 PANTHER OS04G0122200 PROTEIN 1 212 - -
Mal6g0785 361 Gene3D Ribonuclease Inhibitor 1 264 IPR032675 -
Mal6g0785 361 SUPERFAMILY Protein kinase-like (PK-like) 293 334 IPR011009 -
Mal6g0785 361 ProSiteProfiles Protein kinase domain profile. 125 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0785 361 PANTHER OS04G0122200 PROTEIN 294 335 - -
Mal6g0785 361 Gene3D Transferase(Phosphotransferase) domain 1 291 345 - -
Mal6g0785 361 PANTHER LRR RECEPTOR-LIKE KINASE 212 263 - -
Mal6g0785 361 PANTHER LRR RECEPTOR-LIKE KINASE 1 212 - -
Mal6g0785 361 PANTHER LRR RECEPTOR-LIKE KINASE 294 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0785 Mal-Chr6 11505641 11507307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0785 293 334 Receptor kinase-like Gene Family AT3G47570 71.429 8.20e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0785 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0785 - - gmx:100786600 308.145