Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0762 ATGCCTGACACCAAAAAAAGGAAGATCGTGGAAAATAAATATGAAGGACGTGCAGTGGGAATAGACCTTGGAACAACCTATTCTTGTGTTGCTGTGTGGCGTGATGATCACAATAGAGTTGAGATCATTCATAATGATCAAGGCAATAGAACCACACCTTCTGTTGTTGCTTTCACCGATGATCAAAGGTTGATTGGTAATGCTGCTATGAATCAATCTGCCACCAACCCTGAAAATACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTATAGTGATGCTATTGTTCAAAAAGATATAATGTTGTGGCCATTCAAGGTCATTGCGGGCGTCAATGACAAACCCATGATTACTCTTAAGTACAAGGGTCAAGAGAAGCAATTTTGTGCCGAGGAAATATCATCTATGGTTCTTGCAAAGATGCGAGAGGTTGCAGAGGCATATCTGGCGTCGCCCGTCAAGAATGCTGTTGTTACTGTGCCGGCTTACTTCAACGATTCTCAGCGAAAGGCCACCATAGATGCTGGTGCTATTGCTGGCCTTAATGTCATTCGGATAATTAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAAGTGGTTGTGATAGTAAAAAGAATATTTTTGTCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTATCCTCACAATTAAGGGTGATGTCTTTGAAGTAAAAGCCACCGCAGGAAACACTCATCTTGGGGGAGAGGACTTCGATAACAGAATGGTGAACTATTTTGTAGAAGAGTTAAAAATGAAAAATAAAGTGGACATTAGTGGGAGCCCAAAATCCTTAAGAAGGTTGAGAACTGCCTGTGAGAGGGCAAAAAGGACACTCACATTTGCTTTTGTCACCACTGTTGAGGTAGATTCTTTATTTATGGGAATCGACTTTTCTTCATCAATCACTCGTGCGAAATTTGAAGAAATTAATATGGATTTTTTCAATGAGTGTATGAATATTGTTGACAGTTGTCTCAAGGATTCAAAGTTGCACAAAAATGATATTGATGATGTTGTTCTTGTGGGAGGCTCGTCTAGGATTCCAAAAGTGCAGGATCTATTGTTGGAATTTTTCAAGGGGAAGAATTTGTTCATGCGTATCAATCCAGATGAGGCTGTTGCTTATGGTGCAGCTGTTCATGCTGCTAGTTTGAGTGAAGGCTTTAAGAATGTTCCGAACTTGGTGCTGCGAGATGTTACCCCACTGTCACTTGGTATTTTAGTAGATTTTGAAGGTGTCATGAGTGTTGTGATTCCTAGGAACACTTCCATACCTGTCAAGAAGACAAGAAGATATGCTACCCTTATAGATAACCAGTGCAGTGCCTCGATTGGTGTTTACGAGGGTGAGAGAGCAAGAGCTAGGGACAATAATCTGCTTGGTTTATTCAGTCTTTCTTGCCTTCCAGGTCCCCGTGGACAGCCCTTGGAAGTTAGCTTCTCCGTTGATGAAAATGGAATCCTAACTGTTTCTGCTAAGGAAATATCTACAGGAAATATGAACGAGATCACCATAACCAATGACAAAGAGAGATTATCAGTGTCCGAAATTGAAAAAATGATTAAAGAAGCTGCGAAATACCACTTCGAAGATATGATATTTTTAAGGAAGGCCAAGGTATTGAGTGCATTAGATTCTTGTGTTTACAATGTGAAGAATACTTTAAAGAAGATGGATGTTAATCTAATGCTCTCCCCTCAAGAAAGTGAGAAGATCAACAATGCAATTACTGTTGCTATGAATTTGCTTGATAAGAATAACGAAGAGAAAAAAATAGATGTTCTTGAGGGTCATCTGAAGGAGATGGAGAGCATGTTGAAACAGCTTATAGCCAAGACTAATAATTTTATTGTTCTTTGTTAA 1902 0.3964 MPDTKKRKIVENKYEGRAVGIDLGTTYSCVAVWRDDHNRVEIIHNDQGNRTTPSVVAFTDDQRLIGNAAMNQSATNPENTVFDAKRLIGRKYSDAIVQKDIMLWPFKVIAGVNDKPMITLKYKGQEKQFCAEEISSMVLAKMREVAEAYLASPVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVIRIINEPTAAAIAYGLDKRSGCDSKKNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEELKMKNKVDISGSPKSLRRLRTACERAKRTLTFAFVTTVEVDSLFMGIDFSSSITRAKFEEINMDFFNECMNIVDSCLKDSKLHKNDIDDVVLVGGSSRIPKVQDLLLEFFKGKNLFMRINPDEAVAYGAAVHAASLSEGFKNVPNLVLRDVTPLSLGILVDFEGVMSVVIPRNTSIPVKKTRRYATLIDNQCSASIGVYEGERARARDNNLLGLFSLSCLPGPRGQPLEVSFSVDENGILTVSAKEISTGNMNEITITNDKERLSVSEIEKMIKEAAKYHFEDMIFLRKAKVLSALDSCVYNVKNTLKKMDVNLMLSPQESEKINNAITVAMNLLDKNNEEKKIDVLEGHLKEMESMLKQLIAKTNNFIVLC* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0762 633 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 402 553 IPR029047 -
Mal6g0762 633 Gene3D - 554 628 IPR029048 -
Mal6g0762 633 ProSitePatterns Heat shock hsp70 proteins family signature 3. 351 365 IPR018181 -
Mal6g0762 633 Gene3D - 203 377 - -
Mal6g0762 633 PANTHER HEAT SHOCK PROTEIN 70KDA 13 627 IPR013126 GO:0005524|GO:0140662
Mal6g0762 633 SUPERFAMILY Actin-like ATPase domain 18 202 IPR043129 -
Mal6g0762 633 Pfam Hsp70 protein 18 625 IPR013126 GO:0005524|GO:0140662
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 406 425 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 348 364 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 380 400 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 220 230 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 17 30 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 47 59 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 486 502 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 69 77 - -
Mal6g0762 633 PRINTS 70kDa heat shock protein signature 157 177 - -
Mal6g0762 633 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 403 550 IPR029047 -
Mal6g0762 633 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 555 626 IPR029048 -
Mal6g0762 633 Gene3D - 82 137 - -
Mal6g0762 633 ProSitePatterns Heat shock hsp70 proteins family signature 1. 21 28 IPR018181 -
Mal6g0762 633 SUPERFAMILY Actin-like ATPase domain 208 398 IPR043129 -
Mal6g0762 633 PANTHER HEAT SHOCK 70 KDA PROTEIN 13 627 - -
Mal6g0762 633 Gene3D Actin; Chain A, domain 4 246 329 - -
Mal6g0762 633 Coils Coil 598 625 - -
Mal6g0762 633 Gene3D - 19 395 - -
Mal6g0762 633 ProSitePatterns Heat shock hsp70 proteins family signature 2. 214 227 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0762 Mal-Chr6 11260983 11263572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0762 13 625 Calmodulin-binding Proteins AT3G12580 63.474 0.0 773