Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0753 ATGGAACGTTTCATGAGTAAAAGGATTCTCTTGTTGTTGTGGTACATAATGGCTTTGCAACTTTGTTTCATGTTTGGTGCCTATTCAGAAAATATCTTATTAAGAAGAGGCTTAAGGAGAATGAACAACCCAGTATTGCCGAATACTCAATCTCCAGTCACTATGAATCATGCAAATTCTCTCCAGGTGGTGATTAGCAATGGCATCATTTCCCTCACTTTGGCAAATCCCGGAGGGTATGTCTTAGGAATATCATACTCTGGAATGAACAATGTACTTGAAGCTGGAAATGATGATGATGATAGAGGGTACTTTGATGTTGTTTTTGGCGACACATTTCAGAGAGTCCACGGGACAAGTTTTTCAGTCATAACACAAAACGAGAATATAGTGGAGGTTTCATTTTTAAGGACATGGAGTTCTTCCATGAATGCTTCAAATATCCCTATAAACATAGACCAAAGGTATATAGTGCGAAAAGGCGATTCAGGGTTTTACACTTACGTGATATTTGAACGTCCAAAAGGATTCCCTGCTATTAAAGTTGATCAAATAAGGACTGTTTTTAAGCCCAAAGAAGACAGCTTCAACTATATGGCAATATCAGATACTAGACAAAGAAGAATGGCATCAATGAAAGATAGAGAAGATGGACAAGAATTGGCGTTTCCTGAAGCTGTTCTCTTAACACATCCATCTAATCCACAGTTTAAGGGAGAGGTGGATGACAAATATCAATACTCAACTGAGAACCAATACAATCAAGTTAATGGATGGATTACTGCAGATTCTGAAAAGCCCGTGGGCTTTTGGATCATAACACCTAGTAATGAGTTCCGCAATGGTGGGCCCGTTAAGCAAGACCTCACATCTCATGTTGGCCCAACTTGCCTCTCTATGTTTGTAAGCACCCACTATGCCGGCAAAGAGGTAGCCATCCAATTCCAAGAAGGAGAGACTTATACAAAGGTTTTTGGGCCTATTTTTGTTTACTTGAATTCTGCTTCAAGTAAAGATCAATTTAAATCTCTATGGTCGGATGCTAAACAAAAGCTATCGAATGAAGTTAAAAGTTGGCCTTATAATTTCATTCAGTCAAAAGATTTCATTCCACCTAATCAACGTGGAACACTAATGGGACATTTACAAGTCCAAGACGGGGGGAACAAATCTCAAAATGCTAACAATGCTTACATTGGTCTAGCTTGGGTTGGGGATGCAGGATCATGGCAGAGAGAAAGCAAGGGCTATCAATTTTGGACTCGAACGGACCAAAATGGAAACTTTATTATAAAAAACATTGTACCTAATGTATACAACTTGTTTGCATGGGTTCCGGGCTACATTGGAGATTACAAATATAATGCTCAAATTACAATTAAACCAGGAAACACCATCAAGTTGGATTCACTTGTATATACTCCTCCAAGAAATGGTCCAACTCTATGGGAAATTGGCATTCCAGATCGCTCAGCTGAAGAATTTTATATACCAAACCCTTATCCTAACCTCTTGAACAAATTATTCGATAACGACATCCCAGACAAGTTTAGACAATATGGATTATGGAGCCGTTATACCGATTTATATCCGCATCAAGATCTTGTATACACGGTTGGTGTTAGTAAATATCAAAAGGATTGGTTTTACGCTCATGTTTCAAGGAGCACAGGAAATAAAGCATTTCAAGCAACCACATGGAAGATTATATTTGAACATGCAAGTGAAGTATTGAAAGGAAATTATACATTACAACTTGCCCTTGCAAGTGCCGCTAATGCTGAAGTGCAGGTTTGGTTCAATAACATGAGTGCCAATCCTCCATACTTCACAACAAAGAAAATAGGAGATGATAGTGTAATACCAAGGCATGGAATCCATGGATTATATTGGCTGTTTAGCATAGAAGTACCTAGTGTTCATTTGGTAAAAGGAAGCAATACAATATATTTGAGACAATCAAGACATGATTCATTTTGGCAAGGAGTTCTGTATGATTATATCCGCTTAGAAAGTCCTCCAACTACCAACTTGAAAGTATAG 2043 0.3823 MERFMSKRILLLLWYIMALQLCFMFGAYSENILLRRGLRRMNNPVLPNTQSPVTMNHANSLQVVISNGIISLTLANPGGYVLGISYSGMNNVLEAGNDDDDRGYFDVVFGDTFQRVHGTSFSVITQNENIVEVSFLRTWSSSMNASNIPINIDQRYIVRKGDSGFYTYVIFERPKGFPAIKVDQIRTVFKPKEDSFNYMAISDTRQRRMASMKDREDGQELAFPEAVLLTHPSNPQFKGEVDDKYQYSTENQYNQVNGWITADSEKPVGFWIITPSNEFRNGGPVKQDLTSHVGPTCLSMFVSTHYAGKEVAIQFQEGETYTKVFGPIFVYLNSASSKDQFKSLWSDAKQKLSNEVKSWPYNFIQSKDFIPPNQRGTLMGHLQVQDGGNKSQNANNAYIGLAWVGDAGSWQRESKGYQFWTRTDQNGNFIIKNIVPNVYNLFAWVPGYIGDYKYNAQITIKPGNTIKLDSLVYTPPRNGPTLWEIGIPDRSAEEFYIPNPYPNLLNKLFDNDIPDKFRQYGLWSRYTDLYPHQDLVYTVGVSKYQKDWFYAHVSRSTGNKAFQATTWKIIFEHASEVLKGNYTLQLALASAANAEVQVWFNNMSANPPYFTTKKIGDDSVIPRHGIHGLYWLFSIEVPSVHLVKGSNTIYLRQSRHDSFWQGVLYDYIRLESPPTTNLKV* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0753 680 SUPERFAMILY Starch-binding domain-like 371 470 IPR013784 GO:0030246
Mal6g0753 680 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 56 675 - -
Mal6g0753 680 CDD RGL4_C 483 671 - -
Mal6g0753 680 Gene3D - 370 470 - -
Mal6g0753 680 SUPERFAMILY Galactose mutarotase-like 63 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mal6g0753 680 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 56 675 - -
Mal6g0753 680 SUPERFAMILY Galactose-binding domain-like 478 671 IPR008979 -
Mal6g0753 680 CDD RGL4_M 374 471 IPR029413 -
Mal6g0753 680 Pfam Polysaccharide lyase family 4, domain III 481 670 IPR029411 -
Mal6g0753 680 Pfam Polysaccharide lyase family 4, domain II 395 468 IPR029413 -
Mal6g0753 680 Gene3D - 479 671 - -
Mal6g0753 680 Gene3D - 48 349 IPR014718 GO:0030246
Mal6g0753 680 Pfam Rhamnogalacturonate lyase family 50 241 IPR010325 -
Mal6g0753 680 CDD RGL4_N 56 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0753 Mal-Chr6 11123540 11130028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0753 57 673 Polysaccharide Lyase AT1G09890 52.229 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0753 K18195 - gmx:100776664 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0753 6 11123540 11130028 Mal5g2945 5 87390803 87399387 PCT