Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0749 ATGGGAAGGGGAAAGATTGTGATTCGAAGGATCGACAATTGTACAAGCAGGCAAGTCACTTTCTCAAAGAGGAGAAAAGGATTGATCAAGAAAGCCAAAGAGTTAGCAATCCTATGTGATGCACAAGTTGGACTTATTATATTCTCCAGCACTGGAAAGCTTTATGAATATGCAAACACCAGCATGAAATCAGTGATTGAGAGATATAACATTTGCAAGGAAGACCAACAAGTGACAAATCCAGAATCTGAAGTCAAGTTTTGGCAAAGGGAGGCAGACATTTTAAGGCAGCAACTACAGAGTCTACAAGAAAACCATCGGCAATTGATGGGAGAACAACTTTATGGCTTGAGTATCAGAAACCTACAAGATCTAGAGAGCCAACTGGAACTTAGCCTCCAAGGAGTACGCATGAAAAAGGAGAAAATTCTGACAGATGAAATTCAAGAGCTGAACCGAAAGGGAAATATAATCCATCAAGAAAATGTGGAACTCTATAAGAAGGTAAACCTCATTCAACAAGAAAACACACAACTATACAGAAAGGTCTATGGCACAACAGATACGAGCGCAACAAGCAAAAATGCATTTGTTCAATTTCCATATGATGTTCGCGGAGGAGGAGAATATCCACAAACATTATTTCAACTTCAGTTATGCCAGCCTGAACAAGAGTACTGTGAAACCTCAGGCAGTGCAAGTGCAACAAAATGA 714 0.3978 MGRGKIVIRRIDNCTSRQVTFSKRRKGLIKKAKELAILCDAQVGLIIFSSTGKLYEYANTSMKSVIERYNICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSIRNLQDLESQLELSLQGVRMKKEKILTDEIQELNRKGNIIHQENVELYKKVNLIQQENTQLYRKVYGTTDTSATSKNAFVQFPYDVRGGGEYPQTLFQLQLCQPEQEYCETSGSASATK* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0749 237 SUPERFAMILY SRF-like 2 83 IPR036879 GO:0003677|GO:0046983
Mal6g0749 237 Pfam K-box region 81 169 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mal6g0749 237 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mal6g0749 237 Gene3D - 14 109 IPR036879 GO:0003677|GO:0046983
Mal6g0749 237 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 234 - -
Mal6g0749 237 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mal6g0749 237 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mal6g0749 237 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mal6g0749 237 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 234 - -
Mal6g0749 237 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mal6g0749 237 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mal6g0749 237 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Mal6g0749 237 Coils Coil 85 112 - -
Mal6g0749 237 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mal6g0749 237 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0749 Mal-Chr6 11049530 11061685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0749 1 233 MADS-box Gene Family AT2G22630 59.829 2.43e-98 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mal6g0749 K-box 6.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0749 K09264 - gmx:100795778 335.88