Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0734 ATGGAGCTTTCTCAACTTGGTTTTCTTGAGGAGCTACTAGCTCCAAGAAAAGACACATGGAATGCTTTATCCACTGGTTTGAATGAGCTACTACTCCCTAATGGTTGGACCTTTGACTCATTAGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTGTCAACACCTATAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATATTCATACCCTTATGTTGATGGATTCTCAGTTCCAGAGTTTGATGAGTCAGCACAACTTTTACCACAACAAGAAGGTATTGAAGAGTTTGGATTTGTTGGAAGTGAGAACAAGAGTTTGGATCAGAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTAGTGAGACTCCAGTTTTTAACATGGGTTTGTGTGGTGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAAAATCTCATGGCTGAAAGAAGGAGAAGAAAACGTTTGAATGATAGGCTTTCAATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGATGGACAGGACATCAATTCTTGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAATAAGTTACAAGAAGAAATGGAGGAGGAAGGAACAAATCAGATAAACCTTTTAGGAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGTTTGATGTTGAGAGGAGAGACCAAGACACAAGAATCAGCATTTGTTGTGCCACAAAACCAGGATTATTACTGTCAACAGTGAACACATTAGAAGCATTAGGTCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTTGCTGGTCAGAGAAATTGTATGAACCCTGAAGAGATAAAGCAGTCACTATTCAGGAATGCAGGTTATGGTGGGAGATGTCTCTAG 978 0.3834 MELSQLGFLEELLAPRKDTWNALSTGLNELLLPNGWTFDSLDENLLINPSLNPSFASLSTPIDHRFECPYGTDASSYSYPYVDGFSVPEFDESAQLLPQQEGIEEFGFVGSENKSLDQSKISCKVEEQVSETPVFNMGLCGEKKAKSKRVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERINKLQEEMEEEGTNQINLLGISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSEVAGQRNCMNPEEIKQSLFRNAGYGGRCL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0734 325 Gene3D - 142 217 IPR036638 GO:0046983
Mal6g0734 325 Coils Coil 191 218 - -
Mal6g0734 325 PANTHER TRANSCRIPTION FACTOR BHLH61-RELATED 2 325 - -
Mal6g0734 325 SMART finulus 158 207 IPR011598 GO:0046983
Mal6g0734 325 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 325 - -
Mal6g0734 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 217 IPR036638 GO:0046983
Mal6g0734 325 CDD ACT_UUR-ACR-like 251 292 - -
Mal6g0734 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
Mal6g0734 325 Pfam Helix-loop-helix DNA-binding domain 158 201 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0734 Mal-Chr6 10830086 10831915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0734 9 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 47.059 2.92e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g0734 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0734 - - gmx:100806571 527.709