Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0715 ATGAATCTCTGGAGCGACGACAACTCTTCAGTAATGGAGGCTTTCATGACCTCCTCCGATTTATCCACCTTATGGCCACCGGCGCCACCGTCACAACCACTACAAACCACCACCACCACCGGTTTCAACCAAGACACACTTCAACAACGTCTTCAAGCTTTAATAGAAGGAGCAAAAGAAACATGGACTTACGCCATCTTCTGGCAACCTTCTTACGACTATTCTGGTTCTTCTCTTCTTGGTTGGGGTGATGGCTATTACAAAGGTGAAGAAGACAAAACAAAAGCGAAAAAATCAAAAGCTACTTCACCTGCTGAACAAGAACACCGTAGAAAAGTTCTTAGAGAACTTAATTCTTTAATATCTGGTAATCCAGTTTCAGATGAATCTGCAGTTGATGAAGAAGTTACTGACACGGAGTGGTTCTTTTTAGTTTCAATGACTCAGTCTTTTGTCAACGGAGGTGGATTACCTGGACAAGCTTATTTTAATTCAGCTCCGGTATGGTTAACCGGAGCTGAGAATCTTGCCCTCTCGACCTGCGAGAGGGCGAGACAAGGACAAGAACACGGTTTACAGACGCTGGCGTGTATACCGTCGGCAAACGGTGTTTTGGAGCTTGGATCTACTGAATTGATTTATCAGAATCATGATTTGATGAATAAAGTGAAGATGCTTTTCAATTTTAACAATAATTTTGATTTTGGATCTTCTTGGCAGTTAGGTAATAATTCTGCTACAATTGGTAATCATCATCAAGGTGAGAATGATCCTTCTTCGATTTGGATTAGTGATCCTGAAACTAGAGATTCTGTTGATAATAATGCAACAAACACTTCAATTTCAATTCCAAGTCATCAACAACAACAACAACAACATCACAACAATAGCAATAATCAACAGAAGACGATACAATTTGAAACTCATGGATCAAGTACTTTAACAGAAGTACCTAGTGTTGTTCATGTTTCAAGCAAGCAGAATAATAATCAAAGTTTCTTTTCTAAAGAAATGAATCTTTCTGAGTATGGTGGGAGTAACAATCAGCAACGTTTATTGAAGCCAGAATCAGGTGAGATTCTGTGTTTTGGTGAGAGTAAGAAGAGTTCTTATGTTGCTAATAATGGAAATTCGAATTCGAGTTTCTTCTCTGGCCAATCACAGTTAGTTTCAGTTGCTGAGGAGAATCACAATAACAACGGGAATGGAAATGGAAAGAGGAGATCGCCAAATTCGAGAGGGAGCAATAATGAAGATGGAATGCTATCTTTTACTTCTGGTGTAATTGTTCCACCGGGCGCGTCAAATTTGAAATTTTCTAGTGGTACTGGTGGTGGTGATTCGGATCATTCGGATTTGGAGGCTTCGGTGGTGAAGGAGGCGGATAGTAGTCGTGTGGTGGAGCCGGAAAAGAAGCCGAGGAAGAGAGGGAGGAAGCCGGCGAATGGAAGAGAGGAGCCTTTGAATCATGTTGAAGCTGAGAGGCAAAGAAGAGAGAAGTTGAATCAGAGATTCTATGCTCTTCGTGCAGTTGTTCCTAATGTTTCAAAGATGGATAAAGCTTCACTCTTGGGTGATGCTATATCTTATATTACTGAGCTGAAAACAAAGCTTCAGAAGACTGAAGCTGATAAAGATGGATTGGAAAAACAACTTGATTCAGTGAAGAATGAGCTTCAGAAAATCAACGAAAACCCGTCTCATCAGCCACCACCACAACCACAACAGCAACAACCAGTACCCAATAAACCCTCTTCGAATCAAGCTTTAATTGATTTAGATATCGATGTTAAGATTATAGGTTGGGATGCAATGATAAGGGTCCAATGCAGTAAGAAAAACCACCCAGCAGCGAGGTTGATGGCGGCATTAATGGAGCTTGACCTAGAAGTGAACCATGCCAGTGTGTCTGTGGTCAATGATTTGATGATACAACAAGCAACCGTGAAGATGGGGAGTCGTTTTTACACCCAGGAGCAGCTTCGGGCGGCATTGTCCTCTAAAGTTGGGGATGTCCAATAA 2022 0.4139 MNLWSDDNSSVMEAFMTSSDLSTLWPPAPPSQPLQTTTTTGFNQDTLQQRLQALIEGAKETWTYAIFWQPSYDYSGSSLLGWGDGYYKGEEDKTKAKKSKATSPAEQEHRRKVLRELNSLISGNPVSDESAVDEEVTDTEWFFLVSMTQSFVNGGGLPGQAYFNSAPVWLTGAENLALSTCERARQGQEHGLQTLACIPSANGVLELGSTELIYQNHDLMNKVKMLFNFNNNFDFGSSWQLGNNSATIGNHHQGENDPSSIWISDPETRDSVDNNATNTSISIPSHQQQQQQHHNNSNNQQKTIQFETHGSSTLTEVPSVVHVSSKQNNNQSFFSKEMNLSEYGGSNNQQRLLKPESGEILCFGESKKSSYVANNGNSNSSFFSGQSQLVSVAEENHNNNGNGNGKRRSPNSRGSNNEDGMLSFTSGVIVPPGASNLKFSSGTGGGDSDHSDLEASVVKEADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQKTEADKDGLEKQLDSVKNELQKINENPSHQPPPQPQQQQPVPNKPSSNQALIDLDIDVKIIGWDAMIRVQCSKKNHPAARLMAALMELDLEVNHASVSVVNDLMIQQATVKMGSRFYTQEQLRAALSSKVGDVQ* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0715 673 Gene3D - 477 565 IPR036638 GO:0046983
Mal6g0715 673 SMART finulus 491 540 IPR011598 GO:0046983
Mal6g0715 673 MobiDBLite consensus disorder prediction 395 495 - -
Mal6g0715 673 MobiDBLite consensus disorder prediction 562 587 - -
Mal6g0715 673 PANTHER TRANSCRIPTION FACTOR MYC2 40 670 - -
Mal6g0715 673 Pfam Helix-loop-helix DNA-binding domain 489 534 IPR011598 GO:0046983
Mal6g0715 673 Coils Coil 531 565 - -
Mal6g0715 673 PANTHER MYC 40 670 IPR045084 GO:0003700|GO:0006355
Mal6g0715 673 CDD bHLH_AtAIB_like 482 558 - -
Mal6g0715 673 MobiDBLite consensus disorder prediction 246 298 - -
Mal6g0715 673 MobiDBLite consensus disorder prediction 452 495 - -
Mal6g0715 673 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 486 554 IPR036638 GO:0046983
Mal6g0715 673 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 485 534 IPR011598 GO:0046983
Mal6g0715 673 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 47 227 IPR025610 -
Mal6g0715 673 MobiDBLite consensus disorder prediction 395 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0715 Mal-Chr6 10424773 10426794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0715 1 670 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.085 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g0715 bHLH-MYC_N 1.8e-55 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0715 K13422 - gmx:100790168 787.719