Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0704 ATGGCAATTGAAAACCAAGAAAACACAAGTGTTAGAGAAATCAAGCCAAAGAACAGAAGAATCATGGGTGCTGGAGGTCCTGATGATGATGATAACAGATGGCCACCATGGTTGAAACCATTGCTGAAAGAGAGTTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAAAGTGAATGTAACATGTATTGTTTGGATTGTATGAATGGTCCTCTCTGTTCTCTCTGTCTTGCTTATCACAAAGATCACCGTTACATTCAGATTAGGAGGTCTTCATACCATGATGTGATAAGGGTGAATGAGATTCAGAAACACTTGGATATTACTGGTGTTCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCAGGGAAAGGTGTCACAAACACTTGTGAAGTTTGTGAGCGTAGCCTTCTTGATTCCTTCCGGTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACATCTAAGAATTTCCAGAAGAAAAAGAAAGAATTAAGAGCAATGGCATCAGATTCTGAGGAGTCATACAGTAGCAACAACATTCATAGCCGTCAAAAGAAAATCAAAGTTCAAAGCTTCACACCATCTACACCACCACCAACTTCAGTTAATTACAGAACAACCAAGAGAAGAAAGGGAATACCTCATAGAGCCCCATTAGGGGGACTTGATTTAGATTATTTAGATTATTAG 723 0.397 MAIENQENTSVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRYIQIRRSSYHDVIRVNEIQKHLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKKKELRAMASDSEESYSSNNIHSRQKKIKVQSFTPSTPPPTSVNYRTTKRRKGIPHRAPLGGLDLDYLDY* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0704 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
Mal6g0704 240 MobiDBLite consensus disorder prediction 181 218 - -
Mal6g0704 240 MobiDBLite consensus disorder prediction 10 28 - -
Mal6g0704 240 Pfam PLATZ transcription factor 90 161 IPR006734 -
Mal6g0704 240 MobiDBLite consensus disorder prediction 1 28 - -
Mal6g0704 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
Mal6g0704 240 MobiDBLite consensus disorder prediction 179 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0704 Mal-Chr6 10138178 10140073 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal6g0704 PLATZ 6.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0704 - - gmx:100791221 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0704 6 10138178 10140073 Mal6g0704 6 10138178 10140073 ECH
Mal6g0704 6 10138178 10140073 Mal5g2752 5 81855944 81858462 PCT