Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0692 ATGGGTAGGTCACCATGTTGTGATGAGATTGGTGTAAAGAAAGGGCCATGGACACAAGAAGAAGATGAGAAGCTTATTGATTATATCAACAAACATGGCCATGGAAATTGGGGAACACTTTCAAAGCGTGCTGGTTTGAATAGGTGTGGGAAGAGTTGTAGGTTAAGGTGGACAAATTATTTGAGGCCAGATATCAAGAGAGGCAAATTCACTGATGAAGAGGAGAGAATTATCATCAACCTTCATTCAGTACTCGGAAACAAGTGGTCTAAGATTGCAGCTCATCTTCCGGGCCGAACAGATAACGAGATAAAGAATTATTGGAACACAAACATAAGGAAAAAGCTTCTCAAAATGGGAATTGACCCTGAAACTCACAAGCCAAGAACTGATTACAATCACCTCATGAGTCTTTCCAACTTACTTGGCATGTCAAATATAAGCAATACTTTTAGCAACAACAATCCTCTTGGTTTACAGCCAGATATCACTCACCTAGCCAAAATGCAATTGTTGCAAAATATGTTGCAAATTATGAATACCAATAATTCATTTGGTAACATTGGTAATTACCCTTATAACCCCTTAGGAAATATTAATCCTAGCCTTAATCCATTCAATTTGTTTTTGAATGGAACAAACACAATTCAAACTAATGAGCCATTAGTATTGAGTGGTGGTCAAGATTATGCTATGATCCCTAGTTTATATGGACAAAGTGAGTTTTCAAAGATGGATATTTCAAAAGGTGGATCAAGTTTACAAGATCTTGATTATAGCAAAATGAGAAGCATTTCATGTGAAAATCAAGAAGAAAATCCACTTCCTGCTTTGGTTGCTTCCTCTCCAAGAACAGGAATCTTCAATCAAATGGAAAATGACTCTATCAAAGTTCAAATGTCCATTGATCACTCACCTTCAAATGCAATCTTTGATGATTGGGAGAAGTTCCTTGATGATGAATCAAGTGGTGGCTCCTACTGGAAAGAGCTTTTAGACTTGACATCCACTTCTGCGTCACAAATTTCATGGTGA 1035 0.3729 MGRSPCCDEIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNYLRPDIKRGKFTDEEERIIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKMGIDPETHKPRTDYNHLMSLSNLLGMSNISNTFSNNNPLGLQPDITHLAKMQLLQNMLQIMNTNNSFGNIGNYPYNPLGNINPSLNPFNLFLNGTNTIQTNEPLVLSGGQDYAMIPSLYGQSEFSKMDISKGGSSLQDLDYSKMRSISCENQEENPLPALVASSPRTGIFNQMENDSIKVQMSIDHSPSNAIFDDWEKFLDDESSGGSYWKELLDLTSTSASQISW* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0692 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal6g0692 344 CDD SANT 69 112 IPR001005 -
Mal6g0692 344 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal6g0692 344 CDD SANT 16 61 IPR001005 -
Mal6g0692 344 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mal6g0692 344 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal6g0692 344 Gene3D - 13 66 - -
Mal6g0692 344 SMART sant 13 63 IPR001005 -
Mal6g0692 344 SMART sant 66 114 IPR001005 -
Mal6g0692 344 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal6g0692 344 PANTHER MYB TRANSCRIPTION FACTOR 1 335 - -
Mal6g0692 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal6g0692 344 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal6g0692 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 335 - -
Mal6g0692 344 Gene3D - 69 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0692 Mal-Chr6 9795602 9797321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0692 1 333 MYB Transcription Factor Family AT5G16770 47.592 4.90e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g0692 Myb_DNA-binding 4.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0692 K09422 - gmx:778082 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0692 6 9795602 9797321 Mal6g0692 6 9795602 9797321 ECH