Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0688 ATGAATGGGAGACAGCACCGCAACAAATCTTCCATCACCGCAAAACCACAACACCAACATCGTACCAAATCGAAACTCCGCTACGTTAACAAATCCGAACTTATTGTTTCTTCACCTAACTCTGTGGCGGTTGTAGAACGTGTTTCCCCTGAGGTTGTTGATGTCAACGGTAATAACAATAACAACAACACCGTTGATGACGTGGCTAGTTCAAGCAACACCAAGGAAGAAGATGATTATGATAATGAAATTGATATTAGTATGGATAATAAGCTTGATAAGTTGTTAAGTGAAATTCAACAACCTGAATTGTCTCAGGAAGAGATCGCAATTAATGATCAATTGCAACAAGATGAGTTACTTGTCGTGGAATCAATTTATGGAGAAAACGTTTTCAGCCTTGATACATGGAAAGACCTGCGTTGTTTTCAGATACACATAAACATTGATATTTTGGGTGAAATAGGCATTACTGCCAAGGTGAACTCTGTTAATGAACTTCAGACATTAAGCGACAATTCAGACGACTTCTTATACTCTTTCAAAGTTCAATATCTTCCACCGATTGTTTTGACATGTTTGTTGCCTAAGTCGTATCCGAGTCACCAACCACCTATATTTACAATCTCTGTTAAGTGGTTGGAATCTGCGAAGATTTTAAGTTTATGTTCCAAGTTGGATTCAATATGGACAGAACAACAAGGGCAGGAAGTAATTTACAATTGGGTAGAATGGTTACATAGTTCTGCTCTTTCTCATTTGGGATTTGACGAGGAAATTAGATTAGGTCCTTATGGTGTGAATCGTGTTGCGGATGCACGCGTGGTTTCGGGAATTGGATGCATTGATGCTGATATTCCTTTTTTACAAAGCTACAACAATGAGAGACGCCATCAAAACTTCCTTAAAGAATTGCATGAATGTTGCATTTGCTATAGTGAATATCCAGGTACCGAATTCGTTCAGTTACCATGCAAACATTTCTTTTGCCGCAAATGCTTGCAGACCTTTACACAGATACATGTAAAGGAAGGAAACGTTAGTAATCTAAAATGTCTTGATGCAAAATGCAAGGACATGATTCCACCAGGCCTTTTAAAACACTTTCTTGGTGATGAAGAATACGAACGTTGGGAATCTATGATGTTAGAGAAAACGCTTGCATCAATGTCTGATGTTGTTTATTGCCCAAGATGTGAAACACCCTGTATAGAGGAGGAAGACCAACATGCTCAGTGCCCAAAATGCTTTTTTAGCTTTTGCACCCTTTGCAGGGAACGCCGCCATGTTGGCATTGCATGCATGACCCTTGATATGAAGCTTCAGCTTTTGCAGGATCGTCAAAATTCATCTCGTTTAAAGGGGAATCAAAGGCAAATTGAACTTGAAAAGATCAATGACATGCTCAGTATCAAAGCAATTCACCGTGATTCCAAGTTGTGCCCTTTTTGTCACATGGCGATTTCTCGAACTGAAGGTTGCAACAAAATGAAGTGCGGTAATTGTGGAGAGTATTTCTGTTACCGCTGCAACAAAGAGCTTGACCCATCAGATCCATATGGACATTTCAGGGAGGGGGGCTCATGTGAATTGTTCCCACCAGAAATGGTTGAGAACTGGCAAGCACGAATAAATCCTCGACAGGAAGTACAACAAATACATGCTGAACTTTTTCACCTTGGTGGTTCATCTTGTCCTAGTTGTCGCCAATTTAATGTAAAGATTGGAAACAATAATCACATGTTATGTTGGGCATGCCAAAGCCATTACTGCTACTTATGCAACGAGATTGTGCGGCGCGGCAGTAAGCATTATGGACCAAAAGGTTGCAAACAGCACAGTGAGGGATAG 1851 0.4025 MNGRQHRNKSSITAKPQHQHRTKSKLRYVNKSELIVSSPNSVAVVERVSPEVVDVNGNNNNNNTVDDVASSSNTKEEDDYDNEIDISMDNKLDKLLSEIQQPELSQEEIAINDQLQQDELLVVESIYGENVFSLDTWKDLRCFQIHINIDILGEIGITAKVNSVNELQTLSDNSDDFLYSFKVQYLPPIVLTCLLPKSYPSHQPPIFTISVKWLESAKILSLCSKLDSIWTEQQGQEVIYNWVEWLHSSALSHLGFDEEIRLGPYGVNRVADARVVSGIGCIDADIPFLQSYNNERRHQNFLKELHECCICYSEYPGTEFVQLPCKHFFCRKCLQTFTQIHVKEGNVSNLKCLDAKCKDMIPPGLLKHFLGDEEYERWESMMLEKTLASMSDVVYCPRCETPCIEEEDQHAQCPKCFFSFCTLCRERRHVGIACMTLDMKLQLLQDRQNSSRLKGNQRQIELEKINDMLSIKAIHRDSKLCPFCHMAISRTEGCNKMKCGNCGEYFCYRCNKELDPSDPYGHFREGGSCELFPPEMVENWQARINPRQEVQQIHAELFHLGGSSCPSCRQFNVKIGNNNHMLCWACQSHYCYLCNEIVRRGSKHYGPKGCKQHSEG* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0688 616 SUPERFAMILY UBC-like 113 248 IPR016135 -
Mal6g0688 616 MobiDBLite consensus disorder prediction 1 25 - -
Mal6g0688 616 Gene3D Ubiquitin Conjugating Enzyme 104 255 IPR016135 -
Mal6g0688 616 Gene3D - 446 559 - -
Mal6g0688 616 ProSiteProfiles TRIAD supradomain profile. 304 533 IPR044066 -
Mal6g0688 616 SUPERFAMILY RING/U-box 376 439 - -
Mal6g0688 616 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 89 561 - -
Mal6g0688 616 SUPERFAMILY RING/U-box 303 387 - -
Mal6g0688 616 ProSiteProfiles RWD domain profile. 118 253 IPR006575 GO:0005515
Mal6g0688 616 MobiDBLite consensus disorder prediction 53 70 - -
Mal6g0688 616 ProSiteProfiles Zinc finger RING-type profile. 308 352 IPR001841 -
Mal6g0688 616 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 392 IPR013083 -
Mal6g0688 616 Pfam RWD domain 114 249 IPR006575 GO:0005515
Mal6g0688 616 MobiDBLite consensus disorder prediction 53 78 - -
Mal6g0688 616 SMART ring_2 396 484 IPR001841 -
Mal6g0688 616 SMART ring_2 308 355 IPR001841 -
Mal6g0688 616 SMART ring_2 565 594 IPR001841 -
Mal6g0688 616 MobiDBLite consensus disorder prediction 11 25 - -
Mal6g0688 616 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 89 561 IPR031127 GO:0004842|GO:0016567
Mal6g0688 616 SMART ibrneu5 376 434 IPR002867 -
Mal6g0688 616 SMART ibrneu5 463 529 IPR002867 -
Mal6g0688 616 Pfam IBR domain, a half RING-finger domain 376 434 IPR002867 -
Mal6g0688 616 Pfam IBR domain, a half RING-finger domain 471 514 IPR002867 -
Mal6g0688 616 SUPERFAMILY RING/U-box 554 613 - -
Mal6g0688 616 ProSitePatterns Zinc finger RING-type signature. 325 334 IPR017907 -
Mal6g0688 616 SUPERFAMILY RING/U-box 468 524 - -
Mal6g0688 616 SMART RWD2001b 118 253 IPR006575 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0688 303 537 ARIADNE family AT3G27710 23.554 1.26e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0688 K11971 - gmx:100500662 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0688 6 9739622 9745717 Mal6g0688 6 9739622 9745717 ECH