Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0686 ATGGATGGAGCAACCGGCACCAGTGGCGGCGGAGATGGGTCAGCCACCCAACTACCGGCGCCGACACCGATGCAAAACGCTAACGCGCCACCGCCGTTTCTGAGCAAAACGTATGACATGGTGGATGATCCTTCGACGGACGCGATAGTTTCATGGAGCGCAACCAACAACAGTTTCATTGTTTGGGACCCACCAGAATTCGCTAGGGACCTTTTGCCCAAGTTCTTCAAGCATAACAATTTCTCAAGCTTTGTGAGACAGTTGAATACATATGGTTTCAGGAAGGTCGACCCAGATCGTTGGGAATTTGCAAATGAAGGCTTTTTGAGGGGTCAAAAGCAATTGCTTAAGAGTATAACTCGACGAAAACCTGCCCATGGTCATACTCAACAACAGGCTCAGCAACCGCATGGACAGAGTTCATCAGTAGGGGCATGTGTAGAAGTCGGCAAATTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAAAATGTTCTCATGCAAGAGCTTGTGAGGTTGAGACAGCAGCAACAAACCACTGACAACCAGCTGCAAACAATGGTTCAGCGCCTTCAAGGAATGGAGCAACGACAACAGCAAATGATGTCATTCCTTGCCAAAGCTGTCCAAAGCCCTGGCTTCTTTGCTCAGTTTGTGCAACAGCAAAATGATAGCAATAGGCGCATAACTGAAGTCAACAAAAAGCGTCGGCTCAAGCAGGATGGTATTGCTGAAACAACAGAGCAAGCTGCCCCTCCTGATGGACAAATTGTTAAGTATCAACCTCTGATGAATGAAACAGCAAAAGCAATGCTAAGGAAGATCATGAAATGGGATACTCCTCGTGTAGAATCTTTCAGTAAAAACCCAGATAATTACTTGATTGGCGATGGTACATCACCATCCAGTGCAATGGACAGTAGTAGCTCTACAAGCTGGAACTCTGGAGTAACTCTTCAAGAGGTTCCTCCATCTTCAGTGCAGTCTACTCAAATTCCTGCGGCAACAGGGACTCAAGGACACATAGCCTCAGCAGAAAAACCTGAAACTCTATCTGTACCTCAAGTTGCAGCATCTGAAAATGTTATGAAGGATGCAACACATGCAGCACCGACTATCCCAACTTCTCAAGCAGATGTTATAATGCCTGATATACCTTCAATACCAGAGATTGTGCCAAGAAGTATTCTTGATATACCTGAAGACAACTATATGGCTCCAGAGACAGATGATGGGTTTATTGATCCGACTTCACTTGAATCATTACCAATTGATTTGGAATGTCTTTCATCCGGTGCAGACATTGATGATTTGTTAAGCAATTCTATTTGGGATGATCTTCTGCGAACTCCGATTCCAGAGGATTTTGAGACCAACATTGACGAAATATCCAGAGGGAATGAGGTGCAGCCAACAGAAAATGGATGGGAAAATACTCAACACCTGGATCAACTAACAGAGCAGATGGGTCTTCTTTCCTCTGATGCCAAAAGAATTTAA 1506 0.4495 MDGATGTSGGGDGSATQLPAPTPMQNANAPPPFLSKTYDMVDDPSTDAIVSWSATNNSFIVWDPPEFARDLLPKFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSITRRKPAHGHTQQQAQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQDGIAETTEQAAPPDGQIVKYQPLMNETAKAMLRKIMKWDTPRVESFSKNPDNYLIGDGTSPSSAMDSSSSTSWNSGVTLQEVPPSSVQSTQIPAATGTQGHIASAEKPETLSVPQVAASENVMKDATHAAPTIPTSQADVIMPDIPSIPEIVPRSILDIPEDNYMAPETDDGFIDPTSLESLPIDLECLSSGADIDDLLSNSIWDDLLRTPIPEDFETNIDEISRGNEVQPTENGWENTQHLDQLTEQMGLLSSDAKRI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0686 501 MobiDBLite consensus disorder prediction 234 258 - -
Mal6g0686 501 MobiDBLite consensus disorder prediction 294 340 - -
Mal6g0686 501 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 487 IPR027725 -
Mal6g0686 501 SUPERFAMILY "Winged helix" DNA-binding domain 28 122 IPR036390 -
Mal6g0686 501 MobiDBLite consensus disorder prediction 9 23 - -
Mal6g0686 501 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0686 501 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0686 501 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0686 501 MobiDBLite consensus disorder prediction 125 142 - -
Mal6g0686 501 Coils Coil 151 178 - -
Mal6g0686 501 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0686 501 MobiDBLite consensus disorder prediction 1 32 - -
Mal6g0686 501 MobiDBLite consensus disorder prediction 288 353 - -
Mal6g0686 501 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 7 487 - -
Mal6g0686 501 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0686 501 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0686 501 MobiDBLite consensus disorder prediction 121 142 - -
Mal6g0686 501 Gene3D - 25 123 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0686 Mal-Chr6 9722895 9726474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0686 4 495 HSF AT1G32330 54.167 5.11e-171 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal6g0686 HSF_DNA-bind 1.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0686 K09419 - gmx:100794897 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0686 6 9722895 9726474 Mal6g0686 6 9722895 9726474 ECH