Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0685 ATGACATTGGTTATAAGAGAAAGAAGACACAGGCAAGCTCTAAGGCTTTCCTTACCAAAACCTCAAATTCCATCTTCTCATGATTTCCCTAACCAAACCCACATGCCATCATTGTTTTCATCACCATCCTCTCATGGCATCAGAAGCCTCTCAGACCTTGAAAAAGTAGCAGTACTTGGCCATGGAAATGGTGGAATAGTCTACAAAGTTTTTCACAAGAAGAAGAATTCCTTTTATGCATTGAAAGTTTTAAACTTTGATCAAAATGGTATTGGATTTCGCCAACCACCAACGCTTGAAGCTGAGATTCTCAAAAGGGTCGTTGATTCTCCATATATTGTAAGGTGTCATGCAGTTTTTTACAATCCAATATATGTAGCACCGACACTTCAGATTAAAGATGTGTCCGGTGACCTTAGTTTTGTTATGGAGTATATGGAAGGAGGGTCATTGCATGATATCTTGCAAAAACATCATAGGCTTCCTGAGGAAGTGATTTGTGTATTGGCTAAGAGTGTTTTGGAAGGGCTAAACTATTTGCATGGTATGAACATTGTTCATAGAGATATTAAACCTTCAAATTTGCTTGTGAATAAAAAAGGGGAGGTGAAAATAGCAGATTTTGGATTTAGTCATGTAGTTGAAGGTAGATTTGAAGCAAATGATATGAATGCAGGTACATGTGCATACATGAGTCCAGAAAGATTTGATCTTGAAAGATGGGGTGGTGAAAATGTTGATGAATTTGTTGGTGATGTTTGGTCATTAGGTGTTGTGATGTTGGAATGTCTTTTAGGTCATTTTCCTTTGATTGATCCTCAACAGAGACCTGATTGGGCTACTTTGATGTGTGCAATTTGTTTTGGTGAGAGACTAGAGATGCCTGAGAAGGCTTCAGAAAAGTTTCAAAGTTTTGTTAGGAGATGTCTTGAGAAGGATTGGAGGAAGAGAGGAACAGTTTTGGAGCTTCTGAAGCACCCTTTTGTGGAAAGAGACTCTTGCTATTCTAATAAAGGGATGGAGGATTATGTTCTTTGTGGGTGA 1044 0.3841 MTLVIRERRHRQALRLSLPKPQIPSSHDFPNQTHMPSLFSSPSSHGIRSLSDLEKVAVLGHGNGGIVYKVFHKKKNSFYALKVLNFDQNGIGFRQPPTLEAEILKRVVDSPYIVRCHAVFYNPIYVAPTLQIKDVSGDLSFVMEYMEGGSLHDILQKHHRLPEEVICVLAKSVLEGLNYLHGMNIVHRDIKPSNLLVNKKGEVKIADFGFSHVVEGRFEANDMNAGTCAYMSPERFDLERWGGENVDEFVGDVWSLGVVMLECLLGHFPLIDPQQRPDWATLMCAICFGERLEMPEKASEKFQSFVRRCLEKDWRKRGTVLELLKHPFVERDSCYSNKGMEDYVLCG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0685 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mal6g0685 347 SMART serkin_6 53 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0685 347 SUPERFAMILY Protein kinase-like (PK-like) 51 330 IPR011009 -
Mal6g0685 347 Pfam Protein kinase domain 54 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0685 347 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Mal6g0685 347 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 331 IPR045269 GO:0004674|GO:0006914
Mal6g0685 347 Gene3D Transferase(Phosphotransferase) domain 1 47 344 - -
Mal6g0685 347 ProSiteProfiles Protein kinase domain profile. 53 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0685 347 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 5 331 - -
Mal6g0685 347 CDD PKc_MAPKK_plant_like 51 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0685 Mal-Chr6 9701242 9702285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0685 1 330 MAP Kinase Kinase Gene Family AT1G32320 51.818 5.13e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mal6g0685 Pkinase 3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0685 K20604 - gmx:100817973 503.827